Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50086_tII_WHEAT12 97% 0.625 0.691 PF00234 C5_S11 - (0)- - / 1 / - -
51661_tIX_PHYPA14 34% 0.553 0.690 PF00234 0 - (0)- - / - / - -
52451_tII_MAIZE12 68% 0.688 0.689 PF00234 C1_S11 - (0)- - / 1 / - -
53613_tVIII_THECC12 29% 0.596 0.689 PF00234 0 - (0)- - / - / - -
54524_tI_ORYSJ9 59% 0.630 0.687 PF00234 C3_S12 - (0)- - / - / 2 -
55437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
56548_tII_HYAOR12 42% 0.649 0.687 PF00234 0 - (0)- - / - / - -
57572_tIII_POPTR19 42% 0.686 0.686 PF00234 0 - (0)- - / - / - -
58360_tI_RICCO8 49% 0.684 0.684 PF00234 C4_S12 - (0)- - / - / 1 -
59114_tII_ORYSA11 43% 0.650 0.683 PF00234 0 - (0)- - / - / - -
60258_tI_HELAN9 44% 0.664 0.682 PF00234 0 - (0)- - / - / - -
61141_tIII_WHEAT18 39% 0.682 0.682 PF00234 0 - (0)- - / - / - -
62142_tIII_WHEAT19 34% 0.691 0.681 PF00234 0 - (0)- - / - / - -
63397_tI_VITVB8 63% 0.672 0.680 PF00234 C2_S12 - (0)- - / - / 2 -
64262_tI_HORVU10 63% 0.678 0.676 PF00234 C5_S13 - (0)- - / 1 / 1 -
65744_tII_VITVI12 40% 0.658 0.675 PF00234 0 - (0)- - / - / - -
66447_tII_TAMAN12 46% 0.674 0.675 PF00234 0 - (0)- - / - / - -
67311_tI_PICSI8 48% 0.635 0.674 PF00234 C3_S11 - (0)- - / - / 1 -
68388_tI_SORBI8 89% 0.673 0.673 PF00234 C2_S14 - (0)- - / 1 / 3 -
69440_tII_HYAOR12 44% 0.672 0.673 PF00234 1 - (0)- - / - / - -
70682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
71414_tI_ZEADI8 86% 0.670 0.672 PF00234 C2_S14 - (0)- - / 2 / 2 -
72174_tVI_WHEAT12 32% 0.626 0.669 PF00234 0 - (0)- - / - / - -
73465_tIV_VITVI14 49% 0.667 0.669 PF00234 C3_S11 - (0)- - / - / 1 -
74097_tII_WHEAT12 50% 0.667 0.669 PF00234 0 - (0)- - / - / - -
75407_tI_VITVI8 61% 0.629 0.669 PF00234 C3_S13 - (0)- - / - / 3 -
76251_tI_GOSHI8 62% 0.633 0.669 PF00234 C2_S12 - (0)- - / - / 2 -
77561_tIII_ORYSI17 39% 0.626 0.668 PF00234 0 - (0)- - / - / - -
78777_tI_MEDTR8 48% 0.612 0.668 PF00234 C2_S11 - (0)- - / - / 1 -
79429_tI_ZEAMP10 87% 0.646 0.667 PF00234 C1_S14 - (0)- - / 2 / 2 -
80574_tIII_RICCO19 40% 0.626 0.665 PF00234 0 - (0)- - / - / - -
81119_tII_ORYSA12 51% 0.664 0.665 PF14368 0 - (0)- - / - / - -
82270_tI_HORVD11 31% 0.535 0.664 PF00234 0 - (0)- - / - / - -
83122_tII_ORYSA12 55% 0.476 0.664 PF00234 C4_S11 - (0)- - / - / 1 -
84452_tII_MAIZE12 64% 0.598 0.664 PF00234 C3_S11 - (0)- - / 1 / - -
85453_tII_MAIZE12 38% 0.511 0.664 PF14368 0 - (0)- - / - / - -
86545_tII_BRACM12 48% 0.663 0.664 PF00234 0 - (0)- - / - / - -
87087_tII_WHEAT12 97% 0.643 0.663 PF00234 C2_S11 - (0)- - / 1 / - -
88294_tI_TOBAC11 42% 0.577 0.663 PF00234 C2_S11 - (0)- - / - / 1 -
89603_tI_THECC10 43% 0.586 0.663 PF00234 0 - (0)- - / - / - -
90376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
91127_tII_ARATH12 43% 0.546 0.661 PF00234 0 - (0)- - / - / - -
92120_tII_ORYSA12 57% 0.499 0.660 PF00234 C4_S11 - (0)- - / - / 1 -
93626_tIV_THECC12 50% 0.539 0.660 PF00234 0 - (0)- - / - / - -
94334_tI_PRUDO8 90% 0.668 0.660 PF00234 C2_S13 - (0)- - / 1 / 2 -
95455_tII_MAIZE12 50% 0.660 0.660 PF00234 0 - (0)- - / - / - -
96558_tIII_SOLLC20 34% 0.549 0.660 PF00234 0 - (0)- - / - / - -
97021_tI_WHEAT10 70% 0.647 0.659 PF00234 C5_S13 - (0)- - / 1 / 1 -
98014_tI_WHEAT11 70% 0.658 0.658 PF00234 C5_S13 - (0)- - / 1 / 1 -
99113_tII_WHEAT12 74% 0.672 0.657 PF00234 C3_S11 - (0)- - / - / 1 -
100411_tI_ZEADI8 98% 0.657 0.657 PF00234 C3_S14 - (0)- - / 1 / 3 -

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