Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1jhp_000112 34% 0.731 PF01029 22 - (1)? - / - / - 0
2jhp_000228 50% 0.565 PF00885 C6_S163 - (41)2 - / 1 / 10 3
3jhp_000358 51% 0.589 PF00793 C5_S181 - (78)18 - / 1 / 48 11
4jhp_000420 40% 0.461 PF00484 9 - (0)1 - / - / - 0
5jhp_000527 54% 0.677 PF00215 C2_S140 - (28)10 - / 13 / 3 3
6jhp_0006105 45% 0.484 PF02569 C5_S1295 - (220)20 11 / 47 / 31 24
7jhp_00076 45% 0.552 PF03514 2 - (0)? - / - / - 0
8jhp_000820 68% 0.543 PF00118 0 - (0)? - / - / - 0
9jhp_000917 48% 0.509 PF00166 1 - (0)? - / - / - 0
10jhp_001019 93% 0.483 PF01807 4 - (0)? - / - / - 0
11jhp_001115 40% 0.267 PF00764 8 - (4)? - / - / - 0
12jhp_00127 35% 0.269 PF02597 2 - (2)? - / - / - 0
13jhp_00130 46% -0.115 PF02874 0 - (0)? - / - / - 0
14jhp_00140 22% 0.110 PF00223 1 - (0)? - / - / - 0
15jhp_00154 44% 0.433 PF00265 4 - (4)? - / - / - 0
16jhp_001615 30% 0.382 PF00486 13 - (0)? - / - / - 0
17jhp_00171 33% 0.693 PF00072 4 - (0)? - / - / - 0
18jhp_001819 49% 0.607 PF00278 C3_S131 - (25)3 - / - / 3 0
19jhp_00194 50% 0.397 PF02130 0 - (0)? - / - / - 0
20jhp_002012 32% 0.335 PF01676 3 - (1)? - / - / - 0
21jhp_00214 44% 0.598 PF00604 2 - (0)? - / - / - 0
22jhp_002231 46% 0.548 PF00285 C9_S115 - (11)7 - / 4 / 8 3
23jhp_002337 71% 0.615 PF00180 C7_S157 - (53)16 1 / 14 / 22 5
24jhp_00240 42% -0.004 PF08839 0 - (0)? - / - / - 0
25jhp_002517 96% 0.545 PF02706 C3_S145 - (36)10 - / 5 / 4 5
26jhp_00260 27% 0.208 PF02388 0 - (0)? - / - / - 0
27jhp_002720 37% 0.573 PF00582 19 - (0)? - / - / - 0
28jhp_002811 44% 0.510 PF02617 C2_S119 - (0)? - / - / 2 0
29jhp_002918 58% 0.500 PF10431 C4_S122 - (21)4 - / 8 / 1 2
30jhp_003022 100% 0.704 PF02261 C1_S139 - (6)2 3 / - / 2 2
31jhp_00316 99% 0.691 PF02575 4 - (0)1 - / - / - 0
32jhp_003212 23% 0.344 PF00595 5 - (0)? - / - / - 0
33jhp_00330 35% 0.159 PF00656 3 - (0)? - / - / - 0
34jhp_00342 42% 0.391 PF04335 7 - (0)? - / - / - 0
35jhp_00354 28% 0.330 -2 - (0)? - / - / - 0
36jhp_00360 46% 0.168 PF00232 0 - (0)? - / - / - 0
37jhp_003720 95% 0.647 PF00483 C2_S153 - (39)6 - / 4 / 1 2
38jhp_003820 59% 0.479 PF01370 C1_S155 - (51)4 3 / 2 / - 2
39jhp_003920 37% 0.502 PF01370 71 - (58)? - / - / - 0
40jhp_004020 44% 0.467 PF02769 C5_S129 - (0)3 - / - / 3 1
41jhp_004119 42% 0.474 PF00708 6 - (6)1 - / - / - 0
42jhp_004216 94% 0.556 PF04371 24 - (1)? - / - / - 0
43jhp_004312 43% 0.429 PF01555 16 - (13)? - / - / - 0
44jhp_00441 53% 0.329 PF02008 C9_S192 - (33)2 - / - / 1 0
45jhp_004515 41% 0.317 PF01555 14 - (12)? - / - / - 0
46jhp_00460 50% 0.564 PF13793 2 - (1)? - / - / - 0
47jhp_00475 33% 0.300 PF00566 3 - (0)? - / - / - 0
48jhp_004837 35% 0.355 PF00171 C3_S155 - (0)16 2 / 7 / 7 3
49jhp_00490 30% 0.018 PF00595 36 - (0)? - / - / - 0
50jhp_00501 33% 0.811 PF02798 0 - (0)? - / - / - 0

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