Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1jhp_07557 100% 0.506 PF03966 C11_S115 - (0)2 2 / - / 4 0
2jhp_094012 100% 0.568 PF00613 C5_S113 - (10)4 - / 5 / 3 2
3jhp_008267 100% 0.574 PF01048 C1_S195 - (50)20 - / 38 / 20 15
4jhp_038114 100% 0.483 PF00486 2 - (0)? - / - / - 0
5jhp_073524 100% 0.455 PF00994 C5_S113 - (0)6 - / - / 5 2
6jhp_020815 100% 0.469 PF01248 4 - (0)? - / - / - 0
7jhp_14196 100% 0.894 PF02359 3 - (0)? - / - / - 0
8jhp_097737 100% 0.761 PF01230 C4_S174 - (0)16 - / 15 / 13 9
9jhp_003022 100% 0.704 PF02261 C1_S139 - (6)2 3 / - / 2 2
10jhp_051116 100% 0.414 PF03869 4 - (0)? - / - / - 0
11jhp_112421 100% 0.551 PF00687 C2_S17 - (0)4 - / - / 3 0
12jhp_08335 100% 0.574 PF00476 4 - (0)? - / - / - 0
13jhp_009718 100% 0.603 PF02664 C3_S15 - (3)3 - / - / 3 2
14jhp_00665 100% 0.206 PF02293 C5_S112 - (0)1 - / - / 1 1
15jhp_049640 100% 0.649 PF01177 C4_S148 - (36)8 - / 1 / 37 3
16jhp_038629 100% 0.570 PF01220 C6_S130 - (3)17 3 / 15 / 4 8
17jhp_059820 100% 0.598 PF00210 0 - (0)? - / - / - 0
18jhp_066138 99% 0.606 PF00710 C10_S129 - (29)14 - / - / 20 4
19jhp_006520 99% 0.532 PF02814 0 - (0)? - / - / - 0
20jhp_047416 99% 0.582 PF00437 C2_S110 - (0)2 - / 2 / - 2
21jhp_09333 99% 0.582 PF05856 3 - (0)? - / - / - 0
22jhp_104623 99% 0.611 PF01019 C1_S120 - (0)6 - / - / 2 0
23jhp_115920 99% 0.495 PF00795 5 - (4)? - / - / - 0
24jhp_085813 99% 0.661 PF01361 14 - (0)? - / - / - 0
25jhp_016225 99% 0.662 PF01116 C5_S120 - (16)6 - / - / 15 4
26jhp_00316 99% 0.691 PF02575 4 - (0)1 - / - / - 0
27jhp_063620 99% 0.534 PF01144 9 - (2)? - / - / - 0
28jhp_147120 99% 0.408 PF00578 9 - (0)? - / - / - 0
29jhp_071424 99% 0.626 PF00696 C1_S126 - (17)7 - / 3 / 4 3
30jhp_099222 99% 0.525 PF00081 5 - (5)2 - / - / - 0
31jhp_111224 99% 0.528 PF00194 C8_S123 - (2)9 - / - / 6 4
32jhp_117814 99% 0.633 PF00156 31 - (17)? - / - / - 0
33jhp_014520 99% 0.694 PF01202 C2_S164 - (51)7 - / 2 / 4 3
34jhp_039313 99% 0.599 PF01052 2 - (0)? - / - / - 0
35jhp_006318 99% 0.616 PF02492 C3_S122 - (20)2 - / 2 / 2 1
36jhp_032615 99% 0.682 PF14842 0 - (0)? - / - / - 0
37jhp_006820 99% 0.461 PF00547 0 - (0)? - / - / - 0
38jhp_073021 99% 0.575 PF00574 C7_S159 - (0)1 - / - / 1 0
39jhp_06904 99% 0.490 PF00514 28 - (0)? - / - / - 0
40jhp_129038 99% 0.524 PF07977 C4_S126 - (1)19 - / - / 18 2
41jhp_11633 99% 0.587 PF00520 2 - (0)? - / - / - 0
42jhp_01722 98% 0.610 PF05336 5 - (0)? - / - / - 0
43jhp_083719 98% 0.602 PF02492 C2_S123 - (0)3 - / 5 / - 2
44jhp_106615 98% 0.398 PF02195 17 - (0)? - / - / - 0
45jhp_11854 98% 0.466 PF01206 5 - (0)? - / - / - 0
46jhp_03155 98% 0.615 PF03776 2 - (0)? - / - / - 0
47jhp_06583 98% 0.659 PF03223 C3_S15 - (0)1 - / - / 3 1
48jhp_128924 98% 0.575 PF00132 C2_S159 - (24)10 - / 2 / 11 6
49jhp_018170 98% 0.533 PF00106 C1_S1150 - (83)20 29 / 39 / 10 9
50jhp_076424 98% 0.605 PF07992 C3_S197 - (84)6 9 / 3 / 1 2

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