Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1jhp_051116 100% 0.414 PF03869 4 - (0)? - / - / - 0
2jhp_14196 100% 0.894 PF02359 3 - (0)? - / - / - 0
3jhp_038114 100% 0.483 PF00486 2 - (0)? - / - / - 0
4jhp_07557 100% 0.506 PF03966 C11_S115 - (0)2 2 / - / 4 0
5jhp_00665 100% 0.206 PF02293 C5_S112 - (0)1 - / - / 1 1
6jhp_059820 100% 0.598 PF00210 0 - (0)? - / - / - 0
7jhp_020815 100% 0.469 PF01248 4 - (0)? - / - / - 0
8jhp_097737 100% 0.761 PF01230 C4_S174 - (0)16 - / 15 / 13 9
9jhp_094012 100% 0.568 PF00613 C5_S113 - (10)4 - / 5 / 3 2
10jhp_008267 100% 0.574 PF01048 C1_S195 - (50)20 - / 38 / 20 15
11jhp_073524 100% 0.455 PF00994 C5_S113 - (0)6 - / - / 5 2
12jhp_112421 100% 0.551 PF00687 C2_S17 - (0)4 - / - / 3 0
13jhp_049640 100% 0.649 PF01177 C4_S148 - (36)8 - / 1 / 37 3
14jhp_038629 100% 0.570 PF01220 C6_S130 - (3)17 3 / 15 / 4 8
15jhp_08335 100% 0.574 PF00476 4 - (0)? - / - / - 0
16jhp_003022 100% 0.704 PF02261 C1_S139 - (6)2 3 / - / 2 2
17jhp_009718 100% 0.603 PF02664 C3_S15 - (3)3 - / - / 3 2
18jhp_073021 99% 0.575 PF00574 C7_S159 - (0)1 - / - / 1 0
19jhp_006520 99% 0.532 PF02814 0 - (0)? - / - / - 0
20jhp_032615 99% 0.682 PF14842 0 - (0)? - / - / - 0
21jhp_066138 99% 0.606 PF00710 C10_S129 - (29)14 - / - / 20 4
22jhp_071424 99% 0.626 PF00696 C1_S126 - (17)7 - / 3 / 4 3
23jhp_047416 99% 0.582 PF00437 C2_S110 - (0)2 - / 2 / - 2
24jhp_063620 99% 0.534 PF01144 9 - (2)? - / - / - 0
25jhp_00316 99% 0.691 PF02575 4 - (0)1 - / - / - 0
26jhp_085813 99% 0.661 PF01361 14 - (0)? - / - / - 0
27jhp_09333 99% 0.582 PF05856 3 - (0)? - / - / - 0
28jhp_111224 99% 0.528 PF00194 C8_S123 - (2)9 - / - / 6 4
29jhp_115920 99% 0.495 PF00795 5 - (4)? - / - / - 0
30jhp_006820 99% 0.461 PF00547 0 - (0)? - / - / - 0
31jhp_11633 99% 0.587 PF00520 2 - (0)? - / - / - 0
32jhp_129038 99% 0.524 PF07977 C4_S126 - (1)19 - / - / 18 2
33jhp_014520 99% 0.694 PF01202 C2_S164 - (51)7 - / 2 / 4 3
34jhp_039313 99% 0.599 PF01052 2 - (0)? - / - / - 0
35jhp_006318 99% 0.616 PF02492 C3_S122 - (20)2 - / 2 / 2 1
36jhp_117814 99% 0.633 PF00156 31 - (17)? - / - / - 0
37jhp_147120 99% 0.408 PF00578 9 - (0)? - / - / - 0
38jhp_104623 99% 0.611 PF01019 C1_S120 - (0)6 - / - / 2 0
39jhp_099222 99% 0.525 PF00081 5 - (5)2 - / - / - 0
40jhp_016225 99% 0.662 PF01116 C5_S120 - (16)6 - / - / 15 4
41jhp_06904 99% 0.490 PF00514 28 - (0)? - / - / - 0
42jhp_050832 98% 0.585 PF00106 C1_S152 - (35)11 5 / 6 / - 3
43jhp_11854 98% 0.466 PF01206 5 - (0)? - / - / - 0
44jhp_008323 98% 0.613 PF00698 C2_S115 - (11)8 - / - / 3 1
45jhp_102416 98% 0.397 PF13181 29 - (0)? - / - / - 0
46jhp_056425 98% 0.513 PF00719 C7_S16 - (6)2 - / - / 4 1
47jhp_03155 98% 0.615 PF03776 2 - (0)? - / - / - 0
48jhp_076424 98% 0.605 PF07992 C3_S197 - (84)6 9 / 3 / 1 2
49jhp_03837 98% 0.583 PF00771 0 - (0)? - / - / - 0
50jhp_06583 98% 0.659 PF03223 C3_S15 - (0)1 - / - / 3 1

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