Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Lmo197584 45% 0.514 PF11798 C3_S1327 - (297)20 - / 11 / 72 12
2Lmo1901108 49% 0.547 PF02569 C5_S1326 - (236)20 7 / 47 / 32 10
3Lmo156593 61% 0.568 PF00476 C4_S1247 - (183)14 42 / 23 / 11 3
4Lmo078624 44% 0.645 PF02525 C1_S1192 - (105)4 - / 2 / - 1
5Lmo25449 35% 0.350 PF14528 C2_S1186 - (185)3 - / 2 / 1 1
6Lmo020391 46% 0.467 PF02868 C8_S1183 - (0)20 - / 18 / 40 38
7Lmo17010 40% 0.065 PF00248 176 - (96)? - / - / - 0
8Lmo097873 78% 0.523 PF01063 C7_S1166 - (137)20 - / 5 / 60 5
9Lmo156466 49% 0.472 PF06827 C11_S1161 - (0)6 - / 36 / 32 1
10Lmo082397 67% 0.624 PF00248 C5_S1157 - (123)18 67 / 5 / 8 5
11Lmo237698 54% 0.567 PF00160 C7_S1152 - (5)20 - / 36 / 23 12
12Lmo224757 53% 0.484 PF00248 C9_S1152 - (121)14 23 / 10 / 3 2
13Lmo281521 52% 0.487 PF00106 152 - (81)2 - / - / - 0
14Lmo008427 41% 0.536 PF00248 C6_S1151 - (103)3 - / - / 6 2
15Lmo17520 44% 0.178 PF07647 150 - (0)? - / - / - 0
16Lmo09540 31% 0.460 PF01405 150 - (0)? - / - / - 0
17Lmo24900 29% 0.096 PF02932 150 - (0)? - / - / - 0
18Lmo270092 49% 0.566 PF00248 C9_S1149 - (88)20 60 / 10 / 6 4
19Lmo090671 69% 0.588 PF02852 C2_S1148 - (105)6 69 / 1 / 3 2
20Lmo086265 44% 0.513 PF00128 C1_S1144 - (45)20 - / - / 48 9
21Lmo261199 72% 0.622 PF05191 C3_S1144 - (131)16 64 / 30 / 4 6
22Lmo247765 62% 0.614 PF01370 C1_S1138 - (120)8 55 / 2 / - 2
23Lmo066427 65% 0.667 PF00132 C1_S1137 - (53)5 - / - / 11 1
24Lmo176651 58% 0.567 PF00551 C4_S1133 - (15)13 - / 15 / 14 4
25Lmo187369 47% 0.699 PF00186 C1_S1127 - (72)20 39 / 7 / 18 12
26Lmo00882 43% 0.491 PF00137 127 - (0)0 - / - / - 0
27Lmo155352 71% 0.628 PF00202 C2_S1126 - (60)17 - / - / 50 8
28Lmo092249 46% 0.552 PF00485 C2_S1125 - (38)20 4 / 33 / 6 15
29Lmo187487 70% 0.657 PF00303 C7_S1123 - (89)20 - / 6 / 79 11
30Lmo023827 45% 0.584 PF12464 C1_S1122 - (76)6 - / - / 8 1
31Lmo131770 43% 0.520 PF13288 C2_S1122 - (55)20 26 / 16 / 28 19
32Lmo034422 52% 0.517 PF00106 C2_S1122 - (72)2 - / - / 1 0
33Lmo25344 60% 0.153 PF00137 120 - (0)? - / - / - 0
34Lmo178253 55% 0.541 PF03372 C1_S1119 - (1)9 - / 9 / 22 1
35Lmo145160 36% 0.590 PF02401 C9_S1117 - (0)20 - / 2 / 74 13
36Lmo00730 35% 0.019 PF00873 117 - (0)? - / - / - 0
37Lmo23950 30% -0.312 PF00381 117 - (0)? - / - / - 0
38Lmo27672 27% 0.573 PF00216 117 - (0)? - / - / - 0
39Lmo079961 52% 0.547 PF13426 C2_S1116 - (0)3 6 / 41 / 11 2
40Lmo021989 71% 0.583 PF00156 C2_S1115 - (48)20 1 / 32 / 39 10
41Lmo013314 28% 0.432 PF13237 114 - (0)? - / - / - 0
42Lmo11420 28% 0.326 PF13085 114 - (0)? - / - / - 0
43Lmo09341 40% 0.239 PF12838 114 - (0)? - / - / - 0
44Lmo19445 55% 0.610 PF13237 114 - (0)? - / - / - 0
45Lmo259261 58% 0.594 PF00248 C7_S1113 - (91)15 36 / 4 / 6 4
46Lmo105185 62% 0.609 PF01327 C6_S1111 - (29)20 - / 19 / 42 9
47Lmo043243 44% 0.719 PF00106 C1_S1110 - (80)9 21 / 9 / - 3
48Lmo043123 50% 0.666 PF12464 C2_S1110 - (67)2 - / - / 3 0
49Lmo253965 72% 0.595 PF00464 C1_S1110 - (56)16 - / 1 / 62 4
50Lmo12050 39% 0.090 PF00026 109 - (0)? - / - / - 0

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