Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Lmo1901108 49% 0.547 PF02569 C5_S1326 - (236)20 7 / 47 / 32 10
2Lmo261199 72% 0.622 PF05191 C3_S1144 - (131)16 64 / 30 / 4 6
3Lmo237698 54% 0.567 PF00160 C7_S1152 - (5)20 - / 36 / 23 12
4Lmo082397 67% 0.624 PF00248 C5_S1157 - (123)18 67 / 5 / 8 5
5Lmo156593 61% 0.568 PF00476 C4_S1247 - (183)14 42 / 23 / 11 3
6Lmo270092 49% 0.566 PF00248 C9_S1149 - (88)20 60 / 10 / 6 4
7Lmo020391 46% 0.467 PF02868 C8_S1183 - (0)20 - / 18 / 40 38
8Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
9Lmo021989 71% 0.583 PF00156 C2_S1115 - (48)20 1 / 32 / 39 10
10Lmo108189 77% 0.650 PF00483 C1_S177 - (32)20 - / 7 / 77 20
11Lmo147388 83% 0.629 PF00012 C2_S1102 - (0)20 12 / 51 / 12 9
12Lmo187487 70% 0.657 PF00303 C7_S1123 - (89)20 - / 6 / 79 11
13Lmo105185 62% 0.609 PF01327 C6_S1111 - (29)20 - / 19 / 42 9
14Lmo197584 45% 0.514 PF11798 C3_S1327 - (297)20 - / 11 / 72 12
15Lmo195380 54% 0.600 PF01048 C4_S181 - (43)20 - / 7 / 53 21
16Lmo034676 35% 0.599 PF00121 C7_S172 - (49)20 - / - / 26 0
17Lmo097873 78% 0.523 PF01063 C7_S1166 - (137)20 - / 5 / 60 5
18Lmo027172 42% 0.573 PF00232 C2_S197 - (71)20 - / 2 / 46 23
19Lmo276171 40% 0.509 PF00232 C1_S184 - (64)20 - / 3 / 45 27
20Lmo090671 69% 0.588 PF02852 C2_S1148 - (105)6 69 / 1 / 3 2
21Lmo205271 63% 0.595 PF01467 C1_S1105 - (87)20 - / 25 / 45 11
22Lmo022371 73% 0.604 PF00291 C2_S181 - (54)20 - / 9 / 57 10
23Lmo030070 38% 0.519 PF00232 C3_S199 - (72)20 - / - / 48 25
24Lmo131770 43% 0.520 PF13288 C2_S1122 - (55)20 26 / 16 / 28 19
25Lmo187369 47% 0.699 PF00186 C1_S1127 - (72)20 39 / 7 / 18 12
26Lmo149467 52% 0.665 PF01048 C1_S192 - (48)20 - / 40 / 15 13
27Lmo165266 43% 0.322 PF00005 C1_S162 - (62)8 - / 23 / 25 5
28Lmo156466 49% 0.472 PF06827 C11_S1161 - (0)6 - / 36 / 32 1
29Lmo162866 70% 0.611 PF00291 C4_S184 - (77)15 6 / 12 / 35 9
30Lmo057465 50% 0.520 PF00232 C4_S1103 - (77)20 - / - / 42 21
31Lmo086265 44% 0.513 PF00128 C1_S1144 - (45)20 - / - / 48 9
32Lmo247765 62% 0.614 PF01370 C1_S1138 - (120)8 55 / 2 / - 2
33Lmo253965 72% 0.595 PF00464 C1_S1110 - (56)16 - / 1 / 62 4
34Lmo086665 47% 0.570 PF00271 C4_S160 - (0)12 6 / 17 / 25 6
35Lmo037263 44% 0.527 PF00232 C6_S1101 - (84)20 - / - / 35 17
36Lmo107263 99% 0.567 PF02786 C2_S158 - (25)20 1 / 20 / 21 18
37Lmo018463 68% 0.473 PF00128 C1_S199 - (0)20 - / - / 47 10
38Lmo000663 72% 0.569 PF01751 C3_S161 - (0)20 5 / 30 / 13 18
39Lmo079961 52% 0.547 PF13426 C2_S1116 - (0)3 6 / 41 / 11 2
40Lmo259261 58% 0.594 PF00248 C7_S1113 - (91)15 36 / 4 / 6 4
41Lmo022461 59% 0.566 PF00809 C8_S171 - (28)20 - / 5 / 48 24
42Lmo128661 71% 0.511 PF01751 C3_S156 - (0)20 5 / 26 / 14 18
43Lmo277461 39% 0.543 PF08402 C1_S154 - (0)14 - / 5 / 45 7
44Lmo275260 53% 0.432 PF00005 C2_S154 - (54)11 - / 40 / 6 7
45Lmo269360 48% 0.616 PF01712 C3_S188 - (46)20 3 / 26 / 26 21
46Lmo265360 75% 0.585 PF03143 C3_S169 - (0)10 13 / 34 / 9 4
47Lmo145160 36% 0.590 PF02401 C9_S1117 - (0)20 - / 2 / 74 13
48Lmo115959 82% 0.630 PF00936 C6_S192 - (0)6 - / - / 5 0
49Lmo039059 52% 0.714 PF03167 C8_S184 - (0)20 - / 7 / 32 12
50Lmo218258 36% 0.465 PF00005 C1_S156 - (0)12 - / 10 / 32 6

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