Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100Lmo274345 63% 0.568 PF00923 C4_S140 - (1)12 - / 1 / 27 5
101Lmo249645 39% 0.586 PF00005 C1_S143 - (40)10 - / 11 / 22 5
102Lmo210545 41% 0.551 PF07670 C5_S164 - (0)12 5 / 27 / 9 7
103Lmo022645 47% 0.565 PF01288 C8_S195 - (40)20 - / 6 / 27 12
104Lmo097545 50% 0.553 PF06026 C9_S140 - (16)16 - / - / 22 7
105Lmo049145 58% 0.623 PF01487 C6_S151 - (36)20 - / - / 38 11
106Lmo273944 35% 0.591 PF02146 C9_S1100 - (0)19 3 / 3 / 14 4
107Lmo247144 62% 0.634 PF00724 C4_S198 - (48)4 1 / 1 / 24 1
108Lmo003644 70% 0.650 PF02729 C7_S145 - (37)11 - / 8 / 19 5
109Lmo180144 57% 0.596 PF02978 C8_S160 - (0)13 3 / 13 / 13 4
110Lmo275844 74% 0.535 PF00478 C2_S164 - (45)19 - / 13 / 24 6
111Lmo043243 44% 0.719 PF00106 C1_S1110 - (80)9 21 / 9 / - 3
112Lmo080743 49% 0.574 PF00005 C2_S132 - (0)13 - / 3 / 18 5
113Lmo234643 54% 0.609 PF08402 C1_S147 - (0)11 - / 15 / 18 5
114Lmo137143 42% 0.574 PF02852 C2_S156 - (51)3 33 / 1 / - 1
115Lmo148843 49% 0.543 PF01467 C3_S188 - (55)18 15 / 7 / 9 6
116Lmo220542 61% 0.565 PF00300 C1_S137 - (29)13 - / - / 22 5
117Lmo180742 100% 0.609 PF00106 C1_S159 - (40)12 13 / 5 / 8 3
118Lmo146342 63% 0.626 PF00383 C4_S143 - (26)15 - / - / 34 7
119Lmo247642 38% 0.458 PF01263 C2_S166 - (39)18 - / - / 20 7
120Lmo156641 81% 0.815 PF00180 C6_S156 - (52)16 1 / 14 / 21 5
121Lmo000741 75% 0.570 PF00521 C3_S168 - (0)8 - / 2 / 25 0
122Lmo223641 53% 0.690 PF08501 C7_S151 - (49)10 4 / 16 / 13 5
123Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
124Lmo081840 34% 0.445 PF08282 C2_S134 - (25)12 - / 5 / 9 3
125Lmo113840 100% 0.625 PF00574 C4_S135 - (1)2 - / 1 / 19 0
126Lmo190440 37% 0.498 PF03099 C5_S160 - (15)13 11 / 12 / 8 6
127Lmo153840 70% 0.596 PF00370 C1_S161 - (60)14 - / 2 / 18 4
128Lmo113240 37% 0.406 PF00005 C3_S146 - (45)10 - / 9 / 14 6
129Lmo103440 44% 0.535 PF00370 C4_S157 - (57)8 - / - / 18 1
130Lmo028440 49% 0.548 PF08402 C1_S128 - (0)6 - / 5 / 15 4
131Lmo163140 41% 0.626 PF00591 C13_S173 - (1)20 - / 19 / 25 9
132Lmo158739 60% 0.564 PF02729 C4_S155 - (35)13 - / 8 / 16 5
133Lmo192739 39% 0.554 PF01202 C5_S158 - (53)8 8 / 11 / 13 2
134Lmo271539 36% 0.349 PF00005 C1_S149 - (49)6 - / 22 / 3 4
135Lmo174739 38% 0.497 PF00005 C1_S122 - (0)10 - / 9 / 10 5
136Lmo060739 47% 0.488 PF00005 C2_S150 - (48)8 - / 14 / 6 4
137Lmo237239 38% 0.511 PF00005 C1_S128 - (0)12 - / 5 / 19 5
138Lmo010839 46% 0.399 PF00005 C2_S171 - (71)8 - / 9 / 11 4
139Lmo190638 63% 0.427 PF02142 C6_S132 - (25)6 - / - / 27 2
140Lmo253838 75% 0.565 PF00156 C6_S142 - (33)8 - / 5 / 16 4
141Lmo208938 43% 0.609 PF07859 C1_S170 - (0)9 - / - / 9 2
142Lmo241938 45% 0.512 PF08402 C1_S127 - (0)7 - / 14 / 4 4
143Lmo129538 100% 0.668 PF01423 C6_S160 - (0)13 - / - / 24 4
144Lmo220237 58% 0.583 PF08541 C2_S152 - (30)15 - / 9 / 10 3
145Lmo142137 43% 0.609 PF08402 C1_S138 - (0)8 - / 9 / 5 2
146Lmo219237 35% 0.407 PF00005 C1_S127 - (0)7 - / 3 / 14 4
147Lmo084137 38% 0.400 PF08282 C2_S136 - (25)11 - / 5 / 10 2
148Lmo106337 40% 0.576 PF00005 C1_S122 - (0)10 - / 3 / 18 5
149Lmo101437 40% 0.525 PF00005 C1_S128 - (0)11 - / - / 20 6
150Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6

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