Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
150Lmo220237 58% 0.583 PF08541 C2_S152 - (30)15 - / 9 / 10 3
151Lmo106337 40% 0.576 PF00005 C1_S122 - (0)10 - / 3 / 18 5
152Lmo219237 35% 0.407 PF00005 C1_S127 - (0)7 - / 3 / 14 4
153Lmo049036 100% 0.704 PF08501 C6_S145 - (44)9 12 / 5 / 10 4
154Lmo211436 42% 0.540 PF00005 C1_S123 - (0)11 - / 5 / 17 6
155Lmo142836 43% 0.483 PF08402 C2_S132 - (0)8 - / 9 / 8 4
156Lmo003936 64% 0.574 PF00696 C3_S144 - (19)8 - / 10 / 12 2
157Lmo182736 100% 0.567 PF00625 C1_S146 - (35)14 4 / 13 / 12 5
158Lmo212636 54% 0.497 PF02903 C1_S141 - (0)8 - / 3 / 23 4
159Lmo249536 36% 0.507 PF00005 C1_S132 - (0)10 - / 9 / 19 5
160Lmo282536 52% 0.590 PF00266 C3_S150 - (39)3 - / - / 34 1
161Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
162Lmo155436 52% 0.660 PF00490 C5_S140 - (19)16 - / - / 21 2
163Lmo158936 39% 0.558 PF00696 C1_S153 - (46)12 - / 1 / 18 5
164Lmo022036 74% 0.623 PF09336 C4_S121 - (21)4 - / 14 / 5 3
165Lmo139836 69% 0.615 PF00154 C3_S131 - (0)11 - / 17 / 8 5
166Lmo252436 51% 0.489 PF07977 C2_S123 - (1)17 - / - / 15 0
167Lmo150535 38% 0.524 PF08402 C1_S126 - (0)10 - / 2 / 21 5
168Lmo128735 70% 0.516 PF00521 C2_S169 - (0)8 - / 1 / 29 0
169Lmo172235 39% 0.557 PF00271 C7_S141 - (0)12 - / 6 / 15 6
170Lmo066735 36% 0.442 PF00005 C1_S139 - (0)7 - / 7 / 10 3
171Lmo097035 63% 0.622 PF00106 C3_S165 - (38)10 24 / 5 / 1 3
172Lmo168034 47% 0.554 PF01053 C1_S124 - (16)11 - / 2 / 11 5
173Lmo022534 47% 0.642 PF02152 C8_S127 - (13)11 - / - / 17 6
174Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
175Lmo145034 62% 0.565 PF00271 C3_S161 - (0)9 15 / - / 5 1
176Lmo177534 75% 0.684 PF00731 C8_S137 - (27)12 - / 1 / 17 4
177Lmo007834 47% 0.627 PF02826 C1_S160 - (45)14 5 / 15 / 5 4
178Lmo281133 53% 0.518 PF01926 C2_S147 - (0)4 - / 11 / 12 2
179Lmo219833 72% 0.602 PF00579 C6_S137 - (28)11 6 / 1 / 7 3
180Lmo083733 51% 0.393 PF00005 C1_S157 - (57)9 - / 12 / 5 4
181Lmo202433 43% 0.421 PF02749 C5_S145 - (28)10 - / - / 19 3
182Lmo109333 68% 0.507 PF02540 C4_S155 - (50)11 - / 12 / 14 6
183Lmo175833 61% 0.535 PF03119 C4_S140 - (20)20 - / 18 / 15 14
184Lmo189733 44% 0.613 PF00155 C1_S149 - (36)8 - / 1 / 26 3
185Lmo177233 60% 0.424 PF01259 C2_S155 - (42)14 - / 13 / 16 7
186Lmo025932 52% ? PF04998 61 - (0)0 - / - / - 0
187Lmo213332 39% 0.630 PF01116 C4_S125 - (16)4 - / - / 12 3
188Lmo138932 33% 0.532 PF00005 C2_S135 - (0)6 - / - / 16 4
189Lmo242932 35% 0.457 PF00005 C1_S123 - (0)12 - / - / 15 5
190Lmo174932 37% 0.648 PF01202 C2_S167 - (55)11 - / 1 / 17 4
191Lmo093832 44% 0.633 PF01451 C8_S121 - (2)9 - / - / 15 6
192Lmo225132 68% 0.583 PF08402 C1_S115 - (0)6 - / 6 / 4 3
193Lmo094231 33% 0.395 PF00183 C6_S1106 - (0)18 - / 1 / 18 5
194Lmo190531 46% 0.583 PF01743 C1_S119 - (15)7 - / - / 16 3
195Lmo173931 45% 0.596 PF08402 C1_S124 - (0)7 - / 4 / 4 2
196Lmo193931 59% 0.646 PF02224 C1_S130 - (27)13 - / 14 / 10 6
197Lmo084431 52% 0.544 PF01042 C3_S121 - (0)5 - / - / 5 0
198Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
199Lmo122131 72% 0.487 PF01409 C3_S121 - (16)13 3 / 5 / 8 9
200Lmo022831 70% 0.553 PF01336 C7_S140 - (28)13 1 / 7 / 5 6

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