Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50Lmo125455 47% 0.508 PF00128 C1_S178 - (0)20 - / - / 39 9
51Lmo245852 73% 0.562 PF00162 C11_S181 - (71)18 - / 23 / 22 9
52Lmo086265 44% 0.513 PF00128 C1_S1144 - (45)20 - / - / 48 9
53Lmo105185 62% 0.609 PF01327 C6_S1111 - (29)20 - / 19 / 42 9
54Lmo182025 50% 0.472 PF00069 C2_S151 - (13)10 - / 8 / 7 8
55Lmo168552 50% 0.595 PF00202 C1_S197 - (41)19 - / - / 51 8
56Lmo283123 52% 0.628 PF13419 C1_S135 - (12)13 - / 2 / 15 8
57Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
58Lmo155352 71% 0.628 PF00202 C2_S1126 - (60)17 - / - / 50 8
59Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
60Lmo210545 41% 0.551 PF07670 C5_S164 - (0)12 5 / 27 / 9 7
61Lmo247642 38% 0.458 PF01263 C2_S166 - (39)18 - / - / 20 7
62Lmo245754 65% 0.570 PF00121 C8_S137 - (29)14 - / - / 31 7
63Lmo277461 39% 0.543 PF08402 C1_S154 - (0)14 - / 5 / 45 7
64Lmo187120 36% 0.544 PF00408 C1_S115 - (14)11 - / - / 10 7
65Lmo010756 50% 0.443 PF00005 C2_S168 - (68)12 - / 38 / 5 7
66Lmo074447 48% 0.524 PF00005 C2_S138 - (0)12 - / 13 / 24 7
67Lmo274554 62% 0.450 PF00005 C3_S155 - (55)11 - / 32 / 9 7
68Lmo097545 50% 0.553 PF06026 C9_S140 - (16)16 - / - / 22 7
69Lmo177233 60% 0.424 PF01259 C2_S155 - (42)14 - / 13 / 16 7
70Lmo155929 72% 0.507 PF07973 C4_S126 - (10)14 1 / 8 / 11 7
71Lmo146342 63% 0.626 PF00383 C4_S143 - (26)15 - / - / 34 7
72Lmo275260 53% 0.432 PF00005 C2_S154 - (54)11 - / 40 / 6 7
73Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
74Lmo219353 40% 0.419 PF00005 C1_S169 - (0)12 - / 3 / 35 7
75Lmo149724 49% 0.468 PF00485 C1_S154 - (36)14 3 / 10 / 8 7
76Lmo095727 54% 0.664 PF01182 C5_S120 - (12)12 - / - / 11 6
77Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
78Lmo022831 70% 0.553 PF01336 C7_S140 - (28)13 1 / 7 / 5 6
79Lmo022534 47% 0.642 PF02152 C8_S127 - (13)11 - / - / 17 6
80Lmo013247 71% 0.536 PF00478 C3_S175 - (53)18 - / 22 / 23 6
81Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
82Lmo211436 42% 0.540 PF00005 C1_S123 - (0)11 - / 5 / 17 6
83Lmo183849 58% 0.577 PF02729 C5_S147 - (35)18 - / 20 / 10 6
84Lmo109333 68% 0.507 PF02540 C4_S155 - (50)11 - / 12 / 14 6
85Lmo255627 67% 0.655 PF01116 C2_S122 - (17)9 - / - / 19 6
86Lmo136028 50% 0.652 PF02882 C4_S149 - (40)15 6 / 11 / 14 6
87Lmo245554 81% 0.582 PF03952 C1_S136 - (29)11 - / 2 / 26 6
88Lmo060846 54% 0.461 PF00005 C1_S165 - (65)9 - / 25 / 6 6
89Lmo124658 45% 0.455 PF00271 C6_S160 - (0)13 4 / 19 / 18 6
90Lmo145520 67% 0.569 PF01807 C1_S114 - (0)10 - / 5 / 6 6
91Lmo193931 59% 0.646 PF02224 C1_S130 - (27)13 - / 14 / 10 6
92Lmo172235 39% 0.557 PF00271 C7_S141 - (0)12 - / 6 / 15 6
93Lmo010520 32% 0.434 PF00704 C1_S183 - (2)14 - / - / 12 6
94Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6
95Lmo190440 37% 0.498 PF03099 C5_S160 - (15)13 11 / 12 / 8 6
96Lmo101437 40% 0.525 PF00005 C1_S128 - (0)11 - / - / 20 6
97Lmo218258 36% 0.465 PF00005 C1_S156 - (0)12 - / 10 / 32 6
98Lmo260153 48% 0.474 PF00005 C1_S151 - (0)13 - / 14 / 20 6
99Lmo103951 41% 0.572 PF00005 C1_S141 - (37)16 - / - / 26 6
100Lmo122347 44% 0.535 PF08402 C1_S133 - (0)13 - / 3 / 25 6

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