Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50Lmo147388 83% 0.629 PF00012 C2_S1102 - (0)20 12 / 51 / 12 9
51Lmo125455 47% 0.508 PF00128 C1_S178 - (0)20 - / - / 39 9
52Lmo136354 52% 0.535 PF00348 C1_S185 - (64)20 - / 1 / 41 9
53Lmo220148 96% 0.519 PF02801 C2_S154 - (5)20 - / 7 / 16 9
54Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
55Lmo182025 50% 0.472 PF00069 C2_S151 - (13)10 - / 8 / 7 8
56Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
57Lmo168552 50% 0.595 PF00202 C1_S197 - (41)19 - / - / 51 8
58Lmo283123 52% 0.628 PF13419 C1_S135 - (12)13 - / 2 / 15 8
59Lmo155352 71% 0.628 PF00202 C2_S1126 - (60)17 - / - / 50 8
60Lmo274554 62% 0.450 PF00005 C3_S155 - (55)11 - / 32 / 9 7
61Lmo177233 60% 0.424 PF01259 C2_S155 - (42)14 - / 13 / 16 7
62Lmo277461 39% 0.543 PF08402 C1_S154 - (0)14 - / 5 / 45 7
63Lmo245754 65% 0.570 PF00121 C8_S137 - (29)14 - / - / 31 7
64Lmo187120 36% 0.544 PF00408 C1_S115 - (14)11 - / - / 10 7
65Lmo155929 72% 0.507 PF07973 C4_S126 - (10)14 1 / 8 / 11 7
66Lmo247642 38% 0.458 PF01263 C2_S166 - (39)18 - / - / 20 7
67Lmo219353 40% 0.419 PF00005 C1_S169 - (0)12 - / 3 / 35 7
68Lmo210545 41% 0.551 PF07670 C5_S164 - (0)12 5 / 27 / 9 7
69Lmo074447 48% 0.524 PF00005 C2_S138 - (0)12 - / 13 / 24 7
70Lmo275260 53% 0.432 PF00005 C2_S154 - (54)11 - / 40 / 6 7
71Lmo149724 49% 0.468 PF00485 C1_S154 - (36)14 3 / 10 / 8 7
72Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
73Lmo146342 63% 0.626 PF00383 C4_S143 - (26)15 - / - / 34 7
74Lmo097545 50% 0.553 PF06026 C9_S140 - (16)16 - / - / 22 7
75Lmo010756 50% 0.443 PF00005 C2_S168 - (68)12 - / 38 / 5 7
76Lmo255627 67% 0.655 PF01116 C2_S122 - (17)9 - / - / 19 6
77Lmo093832 44% 0.633 PF01451 C8_S121 - (2)9 - / - / 15 6
78Lmo109333 68% 0.507 PF02540 C4_S155 - (50)11 - / 12 / 14 6
79Lmo103951 41% 0.572 PF00005 C1_S141 - (37)16 - / - / 26 6
80Lmo124658 45% 0.455 PF00271 C6_S160 - (0)13 4 / 19 / 18 6
81Lmo101437 40% 0.525 PF00005 C1_S128 - (0)11 - / - / 20 6
82Lmo022831 70% 0.553 PF01336 C7_S140 - (28)13 1 / 7 / 5 6
83Lmo013247 71% 0.536 PF00478 C3_S175 - (53)18 - / 22 / 23 6
84Lmo245554 81% 0.582 PF03952 C1_S136 - (29)11 - / 2 / 26 6
85Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6
86Lmo018324 35% 0.512 PF01055 C3_S140 - (18)10 - / - / 6 6
87Lmo275844 74% 0.535 PF00478 C2_S164 - (45)19 - / 13 / 24 6
88Lmo095727 54% 0.664 PF01182 C5_S120 - (12)12 - / - / 11 6
89Lmo113240 37% 0.406 PF00005 C3_S146 - (45)10 - / 9 / 14 6
90Lmo260153 48% 0.474 PF00005 C1_S151 - (0)13 - / 14 / 20 6
91Lmo060846 54% 0.461 PF00005 C1_S165 - (65)9 - / 25 / 6 6
92Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
93Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
94Lmo211436 42% 0.540 PF00005 C1_S123 - (0)11 - / 5 / 17 6
95Lmo261199 72% 0.622 PF05191 C3_S1144 - (131)16 64 / 30 / 4 6
96Lmo031923 69% 0.613 PF00232 C2_S193 - (70)12 - / - / 9 6
97Lmo193931 59% 0.646 PF02224 C1_S130 - (27)13 - / 14 / 10 6
98Lmo218258 36% 0.465 PF00005 C1_S156 - (0)12 - / 10 / 32 6
99Lmo183849 58% 0.577 PF02729 C5_S147 - (35)18 - / 20 / 10 6
100Lmo010520 32% 0.434 PF00704 C1_S183 - (2)14 - / - / 12 6

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