Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100Lmo172235 39% 0.557 PF00271 C7_S141 - (0)12 - / 6 / 15 6
101Lmo211436 42% 0.540 PF00005 C1_S123 - (0)11 - / 5 / 17 6
102Lmo101437 40% 0.525 PF00005 C1_S128 - (0)11 - / - / 20 6
103Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
104Lmo183849 58% 0.577 PF02729 C5_S147 - (35)18 - / 20 / 10 6
105Lmo190440 37% 0.498 PF03099 C5_S160 - (15)13 11 / 12 / 8 6
106Lmo193931 59% 0.646 PF02224 C1_S130 - (27)13 - / 14 / 10 6
107Lmo245554 81% 0.582 PF03952 C1_S136 - (29)11 - / 2 / 26 6
108Lmo124658 45% 0.455 PF00271 C6_S160 - (0)13 4 / 19 / 18 6
109Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6
110Lmo223641 53% 0.690 PF08501 C7_S151 - (49)10 4 / 16 / 13 5
111Lmo027846 52% 0.545 PF00005 C2_S133 - (0)10 - / 9 / 17 5
112Lmo059528 55% 0.629 PF01053 C1_S126 - (19)11 - / 2 / 11 5
113Lmo174739 38% 0.497 PF00005 C1_S122 - (0)10 - / 9 / 10 5
114Lmo097873 78% 0.523 PF01063 C7_S1166 - (137)20 - / 5 / 60 5
115Lmo249645 39% 0.586 PF00005 C1_S143 - (40)10 - / 11 / 22 5
116Lmo080743 49% 0.574 PF00005 C2_S132 - (0)13 - / 3 / 18 5
117Lmo179225 46% 0.528 PF01746 C5_S127 - (16)11 - / 15 / 7 5
118Lmo072731 64% ? PF01380 C2_S114 - (13)9 - / - / 11 5
119Lmo168034 47% 0.554 PF01053 C1_S124 - (16)11 - / 2 / 11 5
120Lmo260046 51% 0.556 PF00005 C1_S142 - (0)12 - / 3 / 31 5
121Lmo139836 69% 0.615 PF00154 C3_S131 - (0)11 - / 17 / 8 5
122Lmo234643 54% 0.609 PF08402 C1_S147 - (0)11 - / 15 / 18 5
123Lmo249536 36% 0.507 PF00005 C1_S132 - (0)10 - / 9 / 19 5
124Lmo273520 33% 0.422 PF00128 C1_S146 - (17)11 - / - / 10 5
125Lmo221137 67% 0.611 PF00762 C9_S167 - (3)15 2 / 9 / 11 5
126Lmo264125 37% 0.504 PF00348 C1_S134 - (24)9 - / - / 16 5
127Lmo167928 49% 0.547 PF01053 C1_S124 - (19)11 - / 1 / 13 5
128Lmo242932 35% 0.457 PF00005 C1_S123 - (0)12 - / - / 15 5
129Lmo220542 61% 0.565 PF00300 C1_S137 - (29)13 - / - / 22 5
130Lmo094231 33% 0.395 PF00183 C6_S1106 - (0)18 - / 1 / 18 5
131Lmo158739 60% 0.564 PF02729 C4_S155 - (35)13 - / 8 / 16 5
132Lmo182736 100% 0.567 PF00625 C1_S146 - (35)14 4 / 13 / 12 5
133Lmo003644 70% 0.650 PF02729 C7_S145 - (37)11 - / 8 / 19 5
134Lmo274345 63% 0.568 PF00923 C4_S140 - (1)12 - / 1 / 27 5
135Lmo158849 46% 0.600 PF00202 C1_S162 - (41)9 - / 2 / 26 5
136Lmo158936 39% 0.558 PF00696 C1_S153 - (46)12 - / 1 / 18 5
137Lmo106337 40% 0.576 PF00005 C1_S122 - (0)10 - / 3 / 18 5
138Lmo165266 43% 0.322 PF00005 C1_S162 - (62)8 - / 23 / 25 5
139Lmo277124 52% 0.518 PF00232 C1_S1100 - (72)13 - / - / 11 5
140Lmo170529 33% 0.554 PF01712 C2_S184 - (54)9 - / 10 / 6 5
141Lmo082397 67% 0.624 PF00248 C5_S1157 - (123)18 67 / 5 / 8 5
142Lmo203250 86% 0.603 PF00091 C3_S156 - (0)10 1 / 25 / 17 5
143Lmo207522 42% 0.503 PF00814 C3_S129 - (26)10 - / 10 / 8 5
144Lmo031820 49% 0.702 PF02581 C1_S151 - (40)15 - / 10 / 13 5
145Lmo034350 58% 0.615 PF00923 C3_S141 - (3)12 - / 1 / 25 5
146Lmo236720 73% 0.564 PF00342 C4_S116 - (13)7 - / - / 7 5
147Lmo189624 46% 0.524 PF01336 C3_S130 - (22)10 - / 13 / - 5
148Lmo161920 52% 0.566 PF01063 C8_S157 - (48)11 - / 8 / 13 5
149Lmo073628 67% 0.591 PF02502 C10_S149 - (36)19 - / - / 11 5
150Lmo156641 81% 0.815 PF00180 C6_S156 - (52)16 1 / 14 / 21 5

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