Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100Lmo245554 81% 0.582 PF03952 C1_S136 - (29)11 - / 2 / 26 6
101Lmo148843 49% 0.543 PF01467 C3_S188 - (55)18 15 / 7 / 9 6
102Lmo013247 71% 0.536 PF00478 C3_S175 - (53)18 - / 22 / 23 6
103Lmo060846 54% 0.461 PF00005 C1_S165 - (65)9 - / 25 / 6 6
104Lmo018324 35% 0.512 PF01055 C3_S140 - (18)10 - / - / 6 6
105Lmo218258 36% 0.465 PF00005 C1_S156 - (0)12 - / 10 / 32 6
106Lmo086665 47% 0.570 PF00271 C4_S160 - (0)12 6 / 17 / 25 6
107Lmo150424 49% 0.441 PF07973 C3_S123 - (21)13 1 / 4 / 8 6
108Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
109Lmo113240 37% 0.406 PF00005 C3_S146 - (45)10 - / 9 / 14 6
110Lmo237239 38% 0.511 PF00005 C1_S128 - (0)12 - / 5 / 19 5
111Lmo189624 46% 0.524 PF01336 C3_S130 - (22)10 - / 13 / - 5
112Lmo158739 60% 0.564 PF02729 C4_S155 - (35)13 - / 8 / 16 5
113Lmo264125 37% 0.504 PF00348 C1_S134 - (24)9 - / - / 16 5
114Lmo073628 67% 0.591 PF02502 C10_S149 - (36)19 - / - / 11 5
115Lmo094231 33% 0.395 PF00183 C6_S1106 - (0)18 - / 1 / 18 5
116Lmo150535 38% 0.524 PF08402 C1_S126 - (0)10 - / 2 / 21 5
117Lmo170225 92% 0.563 PF00903 C3_S132 - (0)11 - / - / 16 5
118Lmo156641 81% 0.815 PF00180 C6_S156 - (52)16 1 / 14 / 21 5
119Lmo080743 49% 0.574 PF00005 C2_S132 - (0)13 - / 3 / 18 5
120Lmo274345 63% 0.568 PF00923 C4_S140 - (1)12 - / 1 / 27 5
121Lmo174739 38% 0.497 PF00005 C1_S122 - (0)10 - / 9 / 10 5
122Lmo260046 51% 0.556 PF00005 C1_S142 - (0)12 - / 3 / 31 5
123Lmo242932 35% 0.457 PF00005 C1_S123 - (0)12 - / - / 15 5
124Lmo158849 46% 0.600 PF00202 C1_S162 - (41)9 - / 2 / 26 5
125Lmo001821 56% 0.588 PF00232 C2_S185 - (66)11 - / 1 / 7 5
126Lmo027846 52% 0.545 PF00005 C2_S133 - (0)10 - / 9 / 17 5
127Lmo179225 46% 0.528 PF01746 C5_S127 - (16)11 - / 15 / 7 5
128Lmo249536 36% 0.507 PF00005 C1_S132 - (0)10 - / 9 / 19 5
129Lmo220542 61% 0.565 PF00300 C1_S137 - (29)13 - / - / 22 5
130Lmo072731 64% ? PF01380 C2_S114 - (13)9 - / - / 11 5
131Lmo223641 53% 0.690 PF08501 C7_S151 - (49)10 4 / 16 / 13 5
132Lmo034350 58% 0.615 PF00923 C3_S141 - (3)12 - / 1 / 25 5
133Lmo161920 52% 0.566 PF01063 C8_S157 - (48)11 - / 8 / 13 5
134Lmo163021 42% 0.592 PF00218 C3_S127 - (8)10 - / 5 / 4 5
135Lmo106337 40% 0.576 PF00005 C1_S122 - (0)10 - / 3 / 18 5
136Lmo059528 55% 0.629 PF01053 C1_S126 - (19)11 - / 2 / 11 5
137Lmo158936 39% 0.558 PF00696 C1_S153 - (46)12 - / 1 / 18 5
138Lmo167928 49% 0.547 PF01053 C1_S124 - (19)11 - / 1 / 13 5
139Lmo234643 54% 0.609 PF08402 C1_S147 - (0)11 - / 15 / 18 5
140Lmo170529 33% 0.554 PF01712 C2_S184 - (54)9 - / 10 / 6 5
141Lmo165266 43% 0.322 PF00005 C1_S162 - (62)8 - / 23 / 25 5
142Lmo097873 78% 0.523 PF01063 C7_S1166 - (137)20 - / 5 / 60 5
143Lmo031820 49% 0.702 PF02581 C1_S151 - (40)15 - / 10 / 13 5
144Lmo003644 70% 0.650 PF02729 C7_S145 - (37)11 - / 8 / 19 5
145Lmo139836 69% 0.615 PF00154 C3_S131 - (0)11 - / 17 / 8 5
146Lmo203250 86% 0.603 PF00091 C3_S156 - (0)10 1 / 25 / 17 5
147Lmo277124 52% 0.518 PF00232 C1_S1100 - (72)13 - / - / 11 5
148Lmo168034 47% 0.554 PF01053 C1_S124 - (16)11 - / 2 / 11 5
149Lmo207522 42% 0.503 PF00814 C3_S129 - (26)10 - / 10 / 8 5
150Lmo177430 52% 0.602 PF02222 C2_S154 - (39)8 - / 12 / 10 5

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