Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Lmo123750 100% 0.619 PF01177 C3_S154 - (37)7 - / 1 / 37 3
2Lmo043418 100% 0.638 PF13457 21 - (0)5 - / - / - 0
3Lmo129538 100% 0.668 PF01423 C6_S160 - (0)13 - / - / 24 4
4Lmo113840 100% 0.625 PF00574 C4_S135 - (1)2 - / 1 / 19 0
5Lmo28218 100% 0.499 PF01582 5 - (0)? - / - / - 0
6Lmo142020 100% 0.571 PF01565 C2_S166 - (52)3 6 / - / 2 1
7Lmo020013 100% 0.494 PF00027 C2_S124 - (0)2 - / - / 1 0
8Lmo246820 100% 0.557 PF00574 59 - (0)? - / - / - 0
9Lmo020216 100% 0.415 PF01289 0 - (0)? - / - / - 0
10Lmo193330 100% 0.591 PF01227 C11_S123 - (0)8 - / - / 20 3
11Lmo264220 100% 0.547 PF00149 C2_S16 - (0)1 - / - / 1 0
12Lmo020122 100% 0.804 PF00388 C5_S116 - (11)3 - / - / 2 2
13Lmo049036 100% 0.704 PF08501 C6_S145 - (44)9 12 / 5 / 10 4
14Lmo064420 100% 0.510 PF00884 11 - (4)1 - / - / - 0
15Lmo129012 100% 0.506 PF08191 2 - (0)? - / - / - 0
16Lmo136914 100% 0.579 PF01515 C1_S118 - (6)3 - / - / 3 2
17Lmo222919 100% 0.538 PF00905 C1_S123 - (0)3 - / - / 4 3
18Lmo211317 100% 0.568 PF06778 C6_S116 - (0)1 - / - / 3 0
19Lmo117919 100% 0.555 PF00171 8 - (0)? - / - / - 0
20Lmo094320 100% 0.541 PF00210 0 - (0)? - / - / - 0
21Lmo178620 100% 0.446 PF13457 15 - (0)1 - / - / - 0
22Lmo036316 100% 0.596 PF03575 0 - (0)? - / - / - 0
23Lmo043313 100% 0.759 PF13457 24 - (0)? - / - / - 0
24Lmo182736 100% 0.567 PF00625 C1_S146 - (35)14 4 / 13 / 12 5
25Lmo160026 100% 0.558 PF00793 C3_S168 - (67)4 - / - / 10 2
26Lmo251110 100% 0.674 PF02482 4 - (0)? - / - / - 0
27Lmo234916 100% 0.600 PF00072 C3_S129 - (0)2 - / - / 2 1
28Lmo252625 100% 0.612 PF00275 C6_S126 - (14)6 1 / 3 / 4 3
29Lmo22417 100% 0.651 PF07702 27 - (0)? - / - / - 0
30Lmo042716 100% 0.607 PF02302 5 - (1)? - / - / - 0
31Lmo096820 100% 0.509 PF01513 C1_S141 - (33)19 - / 7 / 12 14
32Lmo146616 100% 0.517 PF13023 C3_S110 - (0)1 - / 1 / - 1
33Lmo180742 100% 0.609 PF00106 C1_S159 - (40)12 13 / 5 / 8 3
34Lmo218513 100% 0.553 PF05031 C4_S124 - (0)2 - / 1 / 1 1
35Lmo052612 100% 0.610 PF13411 29 - (0)? - / - / - 0
36Lmo06744 100% 0.771 PF12181 C7_S18 - (0)2 - / 4 / - 0
37Lmo198720 99% 0.524 PF00682 C2_S123 - (13)5 - / - / 4 1
38Lmo079420 99% 0.539 PF01113 C1_S135 - (28)1 - / - / 1 0
39Lmo188717 99% 0.595 PF05175 C4_S117 - (0)1 - / 2 / 1 1
40Lmo253720 99% 0.604 PF00534 C2_S129 - (19)4 4 / - / 2 1
41Lmo151518 99% 0.660 PF02082 7 - (0)? - / - / - 0
42Lmo074111 99% 0.753 PF07702 14 - (0)1 - / - / - 0
43Lmo092720 99% 0.571 PF00884 12 - (3)? - / - / - 0
44Lmo081512 99% 0.442 PF01047 23 - (0)1 - / - / - 0
45Lmo137420 99% 0.506 PF02817 28 - (28)? - / - / - 0
46Lmo205913 99% 0.270 PF07885 4 - (0)? - / - / - 0
47Lmo163822 99% 0.564 PF02016 C7_S141 - (0)7 - / - / 7 1
48Lmo254520 99% 0.556 PF00288 C1_S146 - (35)3 - / - / 3 1
49Lmo107263 99% 0.567 PF02786 C2_S158 - (25)20 1 / 20 / 21 18
50Lmo142918 99% 0.453 PF09515 C1_S1106 - (0)5 - / - / 4 1

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