Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100Lmo022371 73% 0.604 PF00291 C2_S181 - (54)20 - / 9 / 57 10
101Lmo195380 54% 0.600 PF01048 C4_S181 - (43)20 - / 7 / 53 21
102Lmo085557 49% 0.596 PF01820 C2_S180 - (58)9 - / 20 / 22 3
103Lmo122757 57% 0.620 PF03167 C8_S180 - (0)20 3 / 9 / 27 12
104Lmo263820 32% 0.523 PF07992 80 - (59)? - / - / - 0
105Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
106Lmo108327 59% 0.549 PF01370 C1_S180 - (71)4 23 / 1 / - 2
107Lmo211717 44% 0.486 PF00583 C1_S180 - (46)3 - / 3 / 4 1
108Lmo157929 59% 0.561 PF05222 C3_S180 - (69)10 11 / - / 6 3
109Lmo24808 56% 0.513 PF00132 C2_S180 - (56)1 - / - / 1 0
110Lmo196120 42% 0.572 PF07992 C3_S179 - (70)2 3 / - / - 1
111Lmo238920 54% 0.578 PF07992 79 - (52)? - / - / - 0
112Lmo031729 50% 0.548 PF08543 C1_S178 - (59)8 - / 4 / 11 2
113Lmo125455 47% 0.508 PF00128 C1_S178 - (0)20 - / - / 39 9
114Lmo105553 70% 0.560 PF02852 C1_S177 - (71)2 40 / - / - 1
115Lmo108189 77% 0.650 PF00483 C1_S177 - (32)20 - / 7 / 77 20
116Lmo247822 64% 0.529 PF07992 75 - (61)? - / - / - 0
117Lmo101119 70% 0.710 PF14805 75 - (56)? - / - / - 0
118Lmo013247 71% 0.536 PF00478 C3_S175 - (53)18 - / 22 / 23 6
119Lmo170948 66% 0.595 PF00557 C1_S174 - (1)20 - / - / 28 16
120Lmo066920 61% 0.587 PF00106 C2_S174 - (50)4 5 / - / 2 1
121Lmo272020 40% 0.498 PF13193 C3_S174 - (44)10 - / 4 / 6 4
122Lmo198420 44% 0.566 PF02776 C4_S173 - (28)12 9 / 2 / 8 3
123Lmo163140 41% 0.626 PF00591 C13_S173 - (1)20 - / 19 / 25 9
124Lmo267618 30% 0.443 PF11798 73 - (68)? - / - / - 0
125Lmo034676 35% 0.599 PF00121 C7_S172 - (49)20 - / - / 26 0
126Lmo180351 54% 0.584 PF02978 C6_S172 - (51)14 4 / 15 / 12 3
127Lmo025846 66% 0.333 PF04560 C5_S172 - (0)2 - / - / 20 0
128Lmo010839 46% 0.399 PF00005 C2_S171 - (71)8 - / 9 / 11 4
129Lmo022461 59% 0.566 PF00809 C8_S171 - (28)20 - / 5 / 48 24
130Lmo135746 68% 0.619 PF02786 C2_S171 - (34)20 1 / 15 / 27 18
131Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
132Lmo176120 41% 0.460 -C7_S170 - (0)1 - / - / 2 1
133Lmo140328 41% 0.478 PF00488 C2_S170 - (0)2 - / 14 / 11 0
134Lmo208938 43% 0.609 PF07859 C1_S170 - (0)9 - / - / 9 2
135Lmo07333 46% 0.675 PF08671 70 - (0)1 - / - / - 0
136Lmo211118 40% 0.565 PF00881 70 - (44)1 - / - / - 0
137Lmo149053 45% 0.572 PF08501 C5_S169 - (64)11 2 / 12 / 28 3
138Lmo219353 40% 0.419 PF00005 C1_S169 - (0)12 - / 3 / 35 7
139Lmo114320 45% 0.600 PF00936 69 - (0)? - / - / - 0
140Lmo128735 70% 0.516 PF00521 C2_S169 - (0)8 - / 1 / 29 0
141Lmo139420 36% 0.596 PF00106 69 - (44)? - / - / - 0
142Lmo123111 33% 0.523 PF10391 C2_S169 - (61)3 - / 2 / 3 2
143Lmo265360 75% 0.585 PF03143 C3_S169 - (0)10 13 / 34 / 9 4
144Lmo08062 37% 0.704 PF00717 69 - (0)? - / - / - 0
145Lmo166728 42% 0.600 PF00056 C2_S168 - (58)4 3 / 2 / 3 2
146Lmo160026 100% 0.558 PF00793 C3_S168 - (67)4 - / - / 10 2
147Lmo03309 28% 0.314 PF03539 68 - (0)? - / - / - 0
148Lmo183327 71% 0.559 PF01180 C2_S168 - (56)9 - / 4 / 13 4
149Lmo000741 75% 0.570 PF00521 C3_S168 - (0)8 - / 2 / 25 0
150Lmo048510 41% 0.579 PF00881 C2_S168 - (40)1 - / 1 / - 1

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