Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Lmo187369 47% 0.699 PF00186 C1_S1127 - (72)20 39 / 7 / 18 12
2Lmo000663 72% 0.569 PF01751 C3_S161 - (0)20 5 / 30 / 13 18
3Lmo026131 54% 0.556 PF00232 C1_S152 - (36)20 - / 1 / 17 9
4Lmo135746 68% 0.619 PF02786 C2_S171 - (34)20 1 / 15 / 27 18
5Lmo022371 73% 0.604 PF00291 C2_S181 - (54)20 - / 9 / 57 10
6Lmo185653 75% 0.598 PF01048 C1_S159 - (33)20 - / - / 42 15
7Lmo158623 33% 0.373 PF01513 C4_S141 - (33)20 - / 7 / 16 10
8Lmo037263 44% 0.527 PF00232 C6_S1101 - (84)20 - / - / 35 17
9Lmo269360 48% 0.616 PF01712 C3_S188 - (46)20 3 / 26 / 26 21
10Lmo125455 47% 0.508 PF00128 C1_S178 - (0)20 - / - / 39 9
11Lmo034676 35% 0.599 PF00121 C7_S172 - (49)20 - / - / 26 0
12Lmo145160 36% 0.590 PF02401 C9_S1117 - (0)20 - / 2 / 74 13
13Lmo153050 51% 0.600 PF01702 C7_S138 - (13)20 - / 10 / 18 20
14Lmo105185 62% 0.609 PF01327 C6_S1111 - (29)20 - / 19 / 42 9
15Lmo020391 46% 0.467 PF02868 C8_S1183 - (0)20 - / 18 / 40 38
16Lmo022461 59% 0.566 PF00809 C8_S171 - (28)20 - / 5 / 48 24
17Lmo107263 99% 0.567 PF02786 C2_S158 - (25)20 1 / 20 / 21 18
18Lmo163140 41% 0.626 PF00591 C13_S173 - (1)20 - / 19 / 25 9
19Lmo057465 50% 0.520 PF00232 C4_S1103 - (77)20 - / - / 42 21
20Lmo276171 40% 0.509 PF00232 C1_S184 - (64)20 - / 3 / 45 27
21Lmo039059 52% 0.714 PF03167 C8_S184 - (0)20 - / 7 / 32 12
22Lmo131555 57% 0.540 PF01255 C8_S1101 - (28)20 4 / 24 / 26 14
23Lmo122757 57% 0.620 PF03167 C8_S180 - (0)20 3 / 9 / 27 12
24Lmo147388 83% 0.629 PF00012 C2_S1102 - (0)20 12 / 51 / 12 9
25Lmo018463 68% 0.473 PF00128 C1_S199 - (0)20 - / - / 47 10
26Lmo187487 70% 0.657 PF00303 C7_S1123 - (89)20 - / 6 / 79 11
27Lmo1901108 49% 0.547 PF02569 C5_S1326 - (236)20 7 / 47 / 32 10
28Lmo086265 44% 0.513 PF00128 C1_S1144 - (45)20 - / - / 48 9
29Lmo205271 63% 0.595 PF01467 C1_S1105 - (87)20 - / 25 / 45 11
30Lmo128661 71% 0.511 PF01751 C3_S156 - (0)20 5 / 26 / 14 18
31Lmo220148 96% 0.519 PF02801 C2_S154 - (5)20 - / 7 / 16 9
32Lmo270092 49% 0.566 PF00248 C9_S1149 - (88)20 60 / 10 / 6 4
33Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
34Lmo116829 53% 0.519 PF00871 C6_S151 - (42)20 2 / 8 / 14 12
35Lmo237698 54% 0.567 PF00160 C7_S1152 - (5)20 - / 36 / 23 12
36Lmo097873 78% 0.523 PF01063 C7_S1166 - (137)20 - / 5 / 60 5
37Lmo158130 56% 0.637 PF00871 C3_S161 - (49)20 2 / 9 / 13 12
38Lmo027172 42% 0.573 PF00232 C2_S197 - (71)20 - / 2 / 46 23
39Lmo197584 45% 0.514 PF11798 C3_S1327 - (297)20 - / 11 / 72 12
40Lmo175833 61% 0.535 PF03119 C4_S140 - (20)20 - / 18 / 15 14
41Lmo195380 54% 0.600 PF01048 C4_S181 - (43)20 - / 7 / 53 21
42Lmo030070 38% 0.519 PF00232 C3_S199 - (72)20 - / - / 48 25
43Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
44Lmo136354 52% 0.535 PF00348 C1_S185 - (64)20 - / 1 / 41 9
45Lmo170948 66% 0.595 PF00557 C1_S174 - (1)20 - / - / 28 16
46Lmo049145 58% 0.623 PF01487 C6_S151 - (36)20 - / - / 38 11
47Lmo022645 47% 0.565 PF01288 C8_S195 - (40)20 - / 6 / 27 12
48Lmo149467 52% 0.665 PF01048 C1_S192 - (48)20 - / 40 / 15 13
49Lmo131770 43% 0.520 PF13288 C2_S1122 - (55)20 26 / 16 / 28 19
50Lmo092249 46% 0.552 PF00485 C2_S1125 - (38)20 4 / 33 / 6 15

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