Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
51Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
52Lmo030070 38% 0.519 PF00232 C3_S199 - (72)20 - / - / 48 25
53Lmo107263 99% 0.567 PF02786 C2_S158 - (25)20 1 / 20 / 21 18
54Lmo073628 67% 0.591 PF02502 C10_S149 - (36)19 - / - / 11 5
55Lmo019851 55% 0.570 PF12804 C1_S159 - (41)19 - / 24 / 19 12
56Lmo273944 35% 0.591 PF02146 C9_S1100 - (0)19 3 / 3 / 14 4
57Lmo168552 50% 0.595 PF00202 C1_S197 - (41)19 - / - / 51 8
58Lmo096820 100% 0.509 PF01513 C1_S141 - (33)19 - / 7 / 12 14
59Lmo275844 74% 0.535 PF00478 C2_S164 - (45)19 - / 13 / 24 6
60Lmo247642 38% 0.458 PF01263 C2_S166 - (39)18 - / - / 20 7
61Lmo245852 73% 0.562 PF00162 C11_S181 - (71)18 - / 23 / 22 9
62Lmo183849 58% 0.577 PF02729 C5_S147 - (35)18 - / 20 / 10 6
63Lmo148843 49% 0.543 PF01467 C3_S188 - (55)18 15 / 7 / 9 6
64Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
65Lmo082397 67% 0.624 PF00248 C5_S1157 - (123)18 67 / 5 / 8 5
66Lmo013247 71% 0.536 PF00478 C3_S175 - (53)18 - / 22 / 23 6
67Lmo094231 33% 0.395 PF00183 C6_S1106 - (0)18 - / 1 / 18 5
68Lmo155352 71% 0.628 PF00202 C2_S1126 - (60)17 - / - / 50 8
69Lmo252436 51% 0.489 PF07977 C2_S123 - (1)17 - / - / 15 0
70Lmo155436 52% 0.660 PF00490 C5_S140 - (19)16 - / - / 21 2
71Lmo103951 41% 0.572 PF00005 C1_S141 - (37)16 - / - / 26 6
72Lmo253965 72% 0.595 PF00464 C1_S1110 - (56)16 - / 1 / 62 4
73Lmo261199 72% 0.622 PF05191 C3_S1144 - (131)16 64 / 30 / 4 6
74Lmo156641 81% 0.815 PF00180 C6_S156 - (52)16 1 / 14 / 21 5
75Lmo097545 50% 0.553 PF06026 C9_S140 - (16)16 - / - / 22 7
76Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
77Lmo259261 58% 0.594 PF00248 C7_S1113 - (91)15 36 / 4 / 6 4
78Lmo198849 60% 0.555 PF00180 C6_S150 - (41)15 - / 8 / 23 4
79Lmo220237 58% 0.583 PF08541 C2_S152 - (30)15 - / 9 / 10 3
80Lmo136028 50% 0.652 PF02882 C4_S149 - (40)15 6 / 11 / 14 6
81Lmo031820 49% 0.702 PF02581 C1_S151 - (40)15 - / 10 / 13 5
82Lmo221137 67% 0.611 PF00762 C9_S167 - (3)15 2 / 9 / 11 5
83Lmo146342 63% 0.626 PF00383 C4_S143 - (26)15 - / - / 34 7
84Lmo143548 50% 0.584 PF00701 C6_S142 - (34)15 - / - / 13 4
85Lmo019029 35% 0.474 PF00288 C1_S168 - (48)15 - / 5 / 14 4
86Lmo162866 70% 0.611 PF00291 C4_S184 - (77)15 6 / 12 / 35 9
87Lmo149724 49% 0.468 PF00485 C1_S154 - (36)14 3 / 10 / 8 7
88Lmo177233 60% 0.424 PF01259 C2_S155 - (42)14 - / 13 / 16 7
89Lmo245754 65% 0.570 PF00121 C8_S137 - (29)14 - / - / 31 7
90Lmo277461 39% 0.543 PF08402 C1_S154 - (0)14 - / 5 / 45 7
91Lmo156593 61% 0.568 PF00476 C4_S1247 - (183)14 42 / 23 / 11 3
92Lmo224757 53% 0.484 PF00248 C9_S1152 - (121)14 23 / 10 / 3 2
93Lmo007834 47% 0.627 PF02826 C1_S160 - (45)14 5 / 15 / 5 4
94Lmo267426 51% 0.501 PF02502 C9_S146 - (35)14 - / - / 9 3
95Lmo180351 54% 0.584 PF02978 C6_S172 - (51)14 4 / 15 / 12 3
96Lmo010520 32% 0.434 PF00704 C1_S183 - (2)14 - / - / 12 6
97Lmo155929 72% 0.507 PF07973 C4_S126 - (10)14 1 / 8 / 11 7
98Lmo153840 70% 0.596 PF00370 C1_S161 - (60)14 - / 2 / 18 4
99Lmo182736 100% 0.567 PF00625 C1_S146 - (35)14 4 / 13 / 12 5
100Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6

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