@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q9HWR2_PSEAE_: (2019-02-05 )
MHDAATSMPPQAPSTWADYLAGYRWRGQGEGCSAATVHRLEAARRPTLFVKQEVLSAHAELPAEIARLRWLHGAGIDCPQVLNETQSDGRQWLLMSAVPGDTLSALAQRGELEPERLVRLVAAALRRLHDLDPAACPFDHRLERRLDTVRQRVEAGLVDEADFDDDHRGRSATELYRLLLDRRPAVEDLVVAHGDACLPNLLAEGRRFSGFIDCGRLGVADRHQDLALAARDIEAELGAAWAEAFLVEYGGDIDGERLAYFRLLDEFF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KAN_B_10(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




ATP_A_4(4EJ7)
?
[Raw transfer]




1 PsiBlast_PDB 95.5853%-111 - C2 -1ND4 3.8 KKA2_KLEPN
21 Blastp_CBE 94.9653%-110 - C2 -1ND4 4.9 KKA2_KLEPN
61 SP3 94.6151%-111 - C2 -1ND4 3.8 KKA2_KLEPN
42 HHSearch 89.9253%-111 - C2 -1ND4 3.8 KKA2_KLEPN
44 HHSearch 82.0240% -66 - C- -4H05 - ? -
43 HHSearch 80.8240% -67 - C- -4H05 - ? -
41 HHSearch 75.6234% -22 - C2 -4GKI - ? -
22 Blastp_CBE 74.1535% -18 - C2 -4FEX - ? -
3 PsiBlast_PDB 74.1534% -20 - C2 -4FEX - ? -
26 Blastp_CBE 74.0335% -16 - C2 -4FEV - ? -
5 PsiBlast_PDB 73.5434% -16 - C2 -4FEU - ? -
27 Blastp_CBE 73.4835% -16 - C2 -4FEV - ? -
40 HHSearch 73.1834% -21 - C2 -4GKH - ? -
25 Blastp_CBE 73.1835% -14 - C2 -4FEX - ? -
8 PsiBlast_PDB 72.9234% -14 - C2 -4GKI - ? -
7 PsiBlast_PDB 72.7634% -13 - C2 -4GKH - ? -
28 Blastp_CBE 72.7435% -14 - C2 -4FEV - ? -
9 PsiBlast_PDB 72.4834% -15 - C2 -4EJ7 6.7 ?
2 PsiBlast_PDB 72.2934% -14 - C2 -4FEV - ? -
23 Blastp_CBE 71.6935% -16 - C2 -4FEX - ? -