@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A0BI55_PARTE: (2019-01-25 )
MSISEVQHQLNLTSYLNQQATVSVFLGVKEIQIDQVQQLATHTYKLTFKNSNKKIILHTKSSNAQVTGNQLEKDYMIAQKLSAANMPVPKALFYCGDQSIVGVPFYATEYVEGRLFNDKKLLSVSQTEKKLLFQEVSKALAHLHSISLNYLGLGELESQTSQYQTLNKKLYNLYKLHETKISTNVEDLLYWLSLNSPVKSELDNLCLVHGDFSLSKVVFHPTEPKVLAILDWQQAQLGNAFIDLASFVSPYYIPYSNGQHQIDGWFGIEEIIAQPNLQEVLSAYFTTRSSETTQDINYQLVISLLKQSIDQQILYKQTKEEKYQDNSHFISKAGYELLLRTTEGDPFGIKLRANNDGQLWSNWPVSQRCKSYYYRIKDFMKDEIFPVEKAILDKARAVPRTVKNKPIVEIEELQRKAKAVGLWNLFISDPMYGKGLTNLEYVYLSELMGLSYLAHEVFNCFAPETGNIKLLIAYGTPHQKEKYLKPLLEGQCKSFFAMTEKDVPSSDPNNFQCTITPTEGGFILNGGKWFVSSAPDERAIFGIVMGKSSKDMSNPIESQSMILVDMNNPKIKIVRQYSVLGFFDVPHGYSEVEFDNAFIPQENLLGQLGGAFKMAQGRLLGGRLHHCVRQIGLTRRCLDLMMARSEKRIIFKQSLKDNAAFQERLGDLEIAFQSCRLLSLNAGLLLDSAGSRHLHTFMAVSECKAHIPKACQYIIDQCIQAFGAEGVTEEQPLTLAYRFARAIRFMDGPCEIHLRQISRFAYGNHLFNDLNNAQGYGLAKL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(2WBI)
ACD11_HUMAN
[Raw transfer]




FAD_B_10(2WBI)
ACD11_HUMAN
[Raw transfer]




FAD_B_10(2WBI)
ACD11_HUMAN
[Raw transfer]




FAD_A_2(4HR3)
?
[Raw transfer]




FAD_A_2(4HR3)
?
[Raw transfer]




FDA_A_3(4IV6)
?
[Raw transfer]




FAD_B_7(2PG0)
?
[Raw transfer]




FAD_A_4(1UKW)
?
[Raw transfer]




FAD_A_5(2PG0)
?
[Raw transfer]




FAD_A_2(6AF6)
PIGA_SERS3
[Raw transfer]




FDA_A_3(4N5F)
?
[Raw transfer]




FAD_A_2(6AF6)
PIGA_SERS3
[Raw transfer]




FAD_C_3(2DVL)
?
[Raw transfer]




FAD_A_6(6ES9)
?
[Raw transfer]




CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]




COS_A_4(4L1F)
?
[Raw transfer]




TH3_A_5(2UXW)
ACADV_HUMAN
[Raw transfer]




21 Blastp_CBE 86.0637% -24 - C2 -2WBI 9.6 ACD11_HUMAN
2 PsiBlast_PDB 85.4937% -26 - C2 -2WBI 9.4 ACD11_HUMAN
61 HHSearch 84.9937% -2 - C2 -4HR3 10.6 ?
60 HHSearch 83.7734% -23 - C2 -2WBI 9.6 ACD11_HUMAN
1 PsiBlast_PDB 82.9338% 19 - C2 -4HR3 10.6 ?
46 Fugue 80.5222% -40 - C2 -2Z1Q - ? -
47 Fugue 78.3219% -25 - C2 -2UXW - ACADV_HUMAN -
52 SP3 76.9110% -83 - C2 -3MDD - ACADM_PIG -
50 SP3 74.9810% -96 * C2 *1RX0 - ACAD8_HUMAN -
54 SP3 74.819% -95 - C2 -1IVH - IVD_HUMAN -
53 SP3 74.0811% -90 - C2 -1JQI - ACADS_RAT -
70 HHSearch 73.3621% -34 - C2 -1RX0 - ACAD8_HUMAN -
6 PsiBlast_PDB 72.8926% -33 - C2 -1UKW 8.5 ?
75 HHSearch 72.7619% -30 - C2 -2IX5 - ACOX4_ARATH -
34 Fugue 72.2320% -24 - C2 -3MDD - ACADM_PIG -
74 HHSearch 71.2923% -22 - C2 -2JIF - ACDSB_HUMAN -
78 HHSearch 71.2320% -25 - C2 -1IVH - IVD_HUMAN -
15 PsiBlast_PDB 71.2224% 0 - C- -3B96 - ACADV_HUMAN -
81 HHSearch 71.0319% -28 - C2 -3SWO - ? -
64 HHSearch 70.8821% -28 - C2 -3OWA - ? -
80 HHSearch 70.2320% -20 - C2 -2PG0 6.2 ?
69 HHSearch 69.9719% -24 - C2 -6ES9 8.2 ?
79 HHSearch 69.6620% -19 - C2 -2PG0 6.2 ?
73 HHSearch 69.5723% -29 - C2 -6AF6 6.5 PIGA_SERS3
18 PsiBlast_PDB 68.5624% -13 - C2 -4IV6 7.3 ?
14 PsiBlast_PDB 65.9124% -12 - C2 -2UXW 2.5 ACADV_HUMAN
7 PsiBlast_PDB 64.7227%-102 - C2 -2DVL 4.5 ?
16 PsiBlast_PDB 62.7123% -8 - C2 -4L1F 5.7 ?
19 PsiBlast_PDB 58.8526% -18 - C2 -6AF6 5.6 PIGA_SERS3
9 PsiBlast_PDB 56.3526% -45 - C2 -4N5F 6.3 ?
17 PsiBlast_PDB 49.5924% -20 - C2 -1BUC 6.4 ACDS_MEGEL