@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A3DED6_CLOTH: (2019-01-25 )
MPINHEPLFDVLSQYDIKVVSIRNESYKDKKGVWWIQTPDEYKILKKISNSEDTFKYILSAAEHLRKNGVNIPAVYKTKDGKDYVNINGTCYVLYEAVEGKNPSYNSPEDFRAIVRELAGFHAASVGFSPPDNTKPKIHLGKWVEQYTEQVEDMNRFYQTELEKSENDRIGKVIIEEFPAFYERAKQAIEGLKGKEYQDWVEKVKSRGGLCHQDFAAGNLLKNPSGKIFVLDTDSITIDIPARDIRKLLNKIMKKNGKWDLEILRKFIRIYQSENPLSFSEWTVVKFDLMFPHLFLGAMNKFYYKRDKEWSFEKYLKRINEMTALEKTITPVLENFDSIVYEEINQRKD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4OCV)
?
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




EDO_A_14(3CSV)
?
[Raw transfer]




MES_B_6(3I1A)
?
[Raw transfer]




ACY_A_10(4WH3)
NAHK_BIFL2
[Raw transfer]




24 HHSearch 94.0926%-106 - C3 -2Q83 3.4 COTI_BACSU
1 PsiBlast_PDB 89.4927%-108 - C3 -2Q83 3.4 COTI_BACSU
23 HHSearch 69.0917% 28 - C3 -4PDY - ? -
2 PsiBlast_PDB 67.8220% -36 - C3 -4PDY - ? -
26 HHSearch 62.3520% -20 - C3 -2PPQ - KHSE_AGRFC -
58 Fugue 62.1518% 36 - C3 -4OCV 3.8 ?
3 PsiBlast_PDB 58.6721% 29 - C3 -2PPQ - KHSE_AGRFC -
27 HHSearch 55.4420% 33 - C3 -6EF6 3.7 ?
60 Fugue 52.1112% 43 - C3 -3I1A - ? -
56 Fugue 51.9515% 55 - C3 -1ZYL - SRKA_ECOLI -
28 HHSearch 50.6116% 13 - C3 -4WH3 3.3 NAHK_BIFL2
25 HHSearch 49.8916% 19 - C3 -4OCV - ? -
30 HHSearch 49.8017% 17 * C3 *1ZYL - SRKA_ECOLI -
29 HHSearch 48.5018% 39 - C3 -3I1A 2.4 ?
31 HHSearch 46.6216% 1 - C3 -3CSV 2.8 ?
68 Fugue 44.5014% 33 - C3 -3CSV - ? -
44 HHSearch 43.8114% -2 - C3 -1NW1 - CKA2_CAEEL -
37 HHSearch 41.7612% 23 - C3 -3C5I - ? -
59 Fugue 41.4211% 29 - C3 -3ATS - Y3168_MYCTU -
34 HHSearch 40.6112% 10 - C3 -5IGH - ? -