Study : A4BF35_9GAMM (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C2_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C2_S1
Complex: ADN_A_5(2Q83) / Model_23(2Q83/A) = [3.2] Download1111.6529.18MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
Complex: GMP_A_2(5IGI) / Model_42(5IGI/A) = [3.7] Download1105.3321.67MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
Complex: AMP_A_3(4R78) / Model_46(4R78/A) = [4.0] Download1034.2827.64MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
Complex: GDP_A_2(3TDW) / Model_43(3TDW/A) = [4.2] Download889.1912.81MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
Complex: ADP_A_7(1J7L) / Model_25(1J7L/A) = [4.9] Download869.1718.71MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR
Consensus
[pKd Mean = 4.00]
-1001
(s=104)
22
(s=5)
MAKPELIELATSCFGLTVDEQLPIGESFASEVLRFRSGRQCYVLKRPFSLEKAEREYFWLKRLSHCPFVPDALEITKANDHGLILMTSLEGMPLKSFHQLSHRDLSKLGHDLRALHTVSADSFDGHKSWRELLLSNTDRYIDKIIGPARKTAEMAYARFHEGIDEIPDSYLPTATHFDFRDGNILADESGYTGIIDFESMRGGHASMDFFKLLTHPSDMNDIELTALLAGYGSADWLESMAQLKHLVACYAVYHGLAGLAWCSQREQTSTEFYQRCAGFLEQGR