@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A4W9L8_ENT38: (2019-01-25 )
MWQAISHLLNEQLGEGDIELRNELPGGEIHAAWHLRFAGRDLFVKCDERELLPIFTAEADQLELLSRSKTVSVPKVWALGSDRDYSFLVMDYLPARPLDAHNAFLLGQQIARLHQWSDQPQFGLDFDNDLSTTPQPNAWQRRWSTFFAEQRIGWQLELAAEKGLAFGNIDAIVDHVHQRLASHQPQPSLLHGDLWSENCALGPNGPYIFDPACFWGDRECDLAMLPLHPEQPPQIYDGYQAVSPLPPDFLDRQPIYQLYTLFNRAILFGGEHLVNAQRALDRVLAA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_3(3JR1)
?
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




EDO_A_7(3F7W)
?
[Raw transfer]




MES_B_5(3I1A)
?
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




JFN_A_3(6EF6)
?
[Raw transfer]




87 HHSearch 86.5140% -23 - C2 -3JR1 2.7 ?
1 PsiBlast_PDB 84.9239% -22 - C2 -3JR1 - ? -
21 Blastp_CBE 83.2739% -21 - C2 -3JR1 - ? -
61 Fugue 79.5638% 3 - C2 -3JR1 - ? -
89 HHSearch 70.4629% -32 - C2 -3F7W 3.4 ?
2 PsiBlast_PDB 66.0732% -10 - C2 -3F7W - ? -
99 HHSearch 49.1216% -27 - C2 -3I1A 2.4 ?
108 HHSearch 47.2213% -37 - C2 -3W0S - KHYB_ECOLX -
107 HHSearch 46.6013% -16 - C2 -5IQC - AACA_STAAU -
92 HHSearch 45.9914% -27 - C2 -3TDW - ? -
101 HHSearch 45.9319% -35 - C2 -1ZYL - SRKA_ECOLI -
102 HHSearch 45.4814% -49 - C2 -2PPQ - KHSE_AGRFC -
93 HHSearch 44.4816% -33 - C2 -5IGI - ? -
95 HHSearch 44.2517% -26 - C- -3N4U - ? -
94 HHSearch 43.1116% -32 - C2 -5IGH - ? -
103 HHSearch 42.9916% -40 - C2 -3DXQ - ? -
90 HHSearch 41.3516% -6 - C2 -6EF6 2.9 ?
66 Fugue 41.3216% -0 - C2 -2OLC - MTNK_BACSU -
100 HHSearch 40.9815% -18 - C2 -2Q83 3.4 COTI_BACSU
77 SP3 40.7914% -21 - C2 -1ND4 - KKA2_KLEPN -
97 HHSearch 36.9919% 26 - C2 -4R78 3.9 ?