@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A5ELQ6_BRASB: (2019-01-25 )
MSPIVIKPDLAIDLATAGAVVARTGVDGQIAAISLLYGGEISAVYELALAGGLPPLVLKIYPDSMSWKMRKEARMLDLVRDRLPVPAPRLHLADASRDLIGLDYVVMSRLAGDRLGPLEQQLPPPLRQSAFRQVGRLSRAFHDIAMEAFGYIGPDGVWTAHADNRTYLTVQFDRKLTEFSSRGGAPDLALRIARHVEACSGLFEACAAPVLCHNDLHPGNILARADDDTVTLTGVVDFEGALAGDPLKDVAKALYYLSAGQREAFLEGYGPMTRTEVGATLDIYRLLFSLELWCWYAQFDATDKLAPLIADMELLLRSQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_C_13(5IQI)
AACA_STAAU
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




GNP_A_5(5IQC)
AACA_STAAU
[Raw transfer]




ATP_A_8(3ATT)
Y3168_MYCTU
[Raw transfer]




ANP_A_3(3W0S)
KHYB_ECOLX
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




EDO_A_7(3F7W)
?
[Raw transfer]




UNL_A_3(3JR1)
?
[Raw transfer]




EDO_A_14(3CSV)
?
[Raw transfer]




126 HHSearch 88.8521% -48 - C2 -3F7W 3.3 ?
109 HHSearch 81.7217% 2 - C- -3N4U - ? -
138 Fugue 80.2717% -32 - C2 -3ATS - Y3168_MYCTU -
121 HHSearch 78.9015% -44 - C2 -3DXP - ? -
139 Fugue 78.4716% -57 - C2 -2PPQ - KHSE_AGRFC -
120 HHSearch 77.7518% -40 - C2 -3JR1 2.6 ?
113 HHSearch 76.9815% -10 * C2 *3TDW - ? -
125 HHSearch 75.9818% -65 - C2 -3W0S 3.6 KHYB_ECOLX
132 Fugue 75.0916% -30 - C2 -1ZYL - SRKA_ECOLI -
115 HHSearch 74.1916% 8 - C2 -5IQC 3.8 AACA_STAAU
142 Fugue 73.7116% -14 - C2 -3JR1 - ? -
111 HHSearch 72.1220% -23 - C2 -5IGI - ? -
114 HHSearch 71.7116% 12 - C2 -5IQI 5.5 AACA_STAAU
110 HHSearch 71.4616% -35 - C2 -5UXD - ? -
145 Fugue 71.3616% -17 - C2 -1NW1 - CKA2_CAEEL -
123 HHSearch 71.1417% -18 - C2 -3ATT 3.6 Y3168_MYCTU
124 HHSearch 70.4817% -14 - C2 -3ATS - Y3168_MYCTU -
112 HHSearch 70.4020% -27 - C2 -5IGH - ? -
131 Fugue 68.8318% 4 - C2 -1J7L 5.0 KKA3_ENTFL
133 Fugue 68.7213% -34 - C2 -3HAM - ? -
128 HHSearch 64.8216% 7 - C2 -4R78 3.9 ?
116 HHSearch 59.0516% -5 - C2 -3CSV 2.7 ?