@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A6G1I2_9DELT: (2019-01-26 )
MNRLHAFIDLDRGAVADLTADYSLGELRSVEPLVTGIINTNYVLRTDAGDFLLRLYPPERSADALRFEFSTLARLAEANFPCPRVIANREGKTVAWSEAHARHYAVLEFIPGTTLPREAIDAGVVDQIGSLFADMQRTLSGFVPEGDKPRADLEFVRELGQATLDRIAALPGEGPATAERLRQVWARSHARFDQPKGSVPALERGVVHADLYFDNVIVEGDQIRGVIDFDDSYFGLFLIDLAVTLMEFTFVEADALDFELGERLLRRYYARRPEAKGEAHLLHDGMICACYKYLGYTADLPEYAGEALLGNEYIARIDYLARPEIRAKVEAMIAAAVEVPA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(4WH3)
NAHK_BIFL2
[Raw transfer]




ANP_A_3(4OCV)
?
[Raw transfer]




ANP_A_3(4OCV)
?
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




ZIT_A_3(5IGI)
?
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




37 HHSearch 87.6722%-133 - C3 -2PPQ - KHSE_AGRFC -
1 PsiBlast_PDB 82.9822%-103 - C3 -2PPQ - KHSE_AGRFC -
65 Fugue 80.9423% 1 - C3 -4OCV 4.1 ?
66 Fugue 70.9014% -26 - C3 -2OLC - MTNK_BACSU -
41 HHSearch 68.8115% -98 - C3 -2Q83 3.3 COTI_BACSU
39 HHSearch 67.7719% -24 - C3 -6EF6 2.7 ?
42 HHSearch 67.7420% -4 * C3 *4OCV 4.5 ?
71 Fugue 66.9415% -2 - C3 -1NW1 - CKA2_CAEEL -
61 Fugue 66.7415% -17 - C3 -1ZYL - SRKA_ECOLI -
4 PsiBlast_PDB 64.8023% -16 - C3 -6EF6 - ? -
43 HHSearch 62.3518% -9 - C3 -4WH3 4.5 NAHK_BIFL2
29 SP3 61.6113% 3 - C3 -1NW1 - CKA2_CAEEL -
40 HHSearch 61.4117% -35 - C3 -1ZYL - SRKA_ECOLI -
2 PsiBlast_PDB 60.1724% 13 - C3 -4OCU - ? -
3 PsiBlast_PDB 59.0024% 14 - C3 -4OCV - ? -
51 HHSearch 58.2116% -12 - C3 -3DXQ - ? -
74 Fugue 56.6312% 6 - C3 -2QG7 - ? -
53 HHSearch 56.5620% -4 - C3 -4R78 4.3 ?
44 HHSearch 56.3115% -14 - C3 -3CSV 2.9 ?
68 Fugue 56.1512% -26 - C3 -3ATS - Y3168_MYCTU -
46 HHSearch 49.3017% -52 - C3 -5IGI 3.1 ?