@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A9AZC6_HERA2: (2019-01-26 )
MQINPALAQAIEADSGFELTQVEFIGAGWFAQAYRFCSQAKHYVVRISKHYHDFLKDVYAYQHWGQQLPIPAILAHGQFADGWAYAISPHIAGQTIVSLEAAELRQIQPALFKSLQQLHQLKLGPVTGWGSVNSQGHGRYQSWAEEVLDIGNYKFDFDWHDWIKRDDQTGTLLRQGYRLMEQLLSTISTERSLIHRDFGFDNVLCQPPTIVAVLDWADFGYGDWVYDIAQQSCYGQAEIYLQPWLKFAQQHDLIPDNFEKRLHCYWLRMNLTDLIVSQLRNDWHWQRKIVAELSWLIENPVVVRLNQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_A_2(3W0M)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0R)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0O)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0Q)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0P)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0N)
KHYB_ECOLX
[Raw transfer]




HY0_A_2(3W0S)
KHYB_ECOLX
[Raw transfer]




HY0_A_2(3W0S)
KHYB_ECOLX
[Raw transfer]




HY0_A_3(3W0O)
KHYB_ECOLX
[Raw transfer]




7 PsiBlast_PDB 82.9027% -34 - C4 -3W0S 2.6 KHYB_ECOLX
33 HHSearch 80.9624% -23 - C4 -3W0S 2.5 KHYB_ECOLX
2 PsiBlast_PDB 80.4027% -33 - C4 -3W0N 2.4 KHYB_ECOLX
1 PsiBlast_PDB 80.2027% -27 - C4 -3W0M 3.5 KHYB_ECOLX
5 PsiBlast_PDB 79.8626% -34 - C4 -3W0P 2.4 KHYB_ECOLX
35 HHSearch 79.7024% -25 - C4 -3W0O 2.3 KHYB_ECOLX
3 PsiBlast_PDB 79.6527% -32 - C4 -3W0O 2.5 KHYB_ECOLX
4 PsiBlast_PDB 79.2727% -31 - C4 -3W0R 2.6 KHYB_ECOLX
6 PsiBlast_PDB 79.1726% -29 - C4 -3W0Q 2.6 KHYB_ECOLX
56 Fugue 63.9913% -4 - C4 -3HAM - ? -
34 HHSearch 58.8613% -4 * C4 *3TDW - ? -
63 Fugue 57.1612% -50 - C4 -2PPQ - KHSE_AGRFC -
16 PsiBlast_PDB 56.7621% -13 - C4 -3Q2J - KKA3_ENTFL -
42 HHSearch 56.7314% 9 - C4 -3JR1 - ? -
55 Fugue 56.4317% 10 - C4 -1J7L - KKA3_ENTFL -
49 HHSearch 56.2014% -7 - C4 -5IQC - AACA_STAAU -
50 HHSearch 55.4213% -1 - C4 -5IQI - AACA_STAAU -
37 HHSearch 55.2716% -11 - C- -3N4U - ? -
14 PsiBlast_PDB 53.9221% -9 - C4 -1J7L - KKA3_ENTFL -
15 PsiBlast_PDB 53.7521% -6 - C4 -1J7U - KKA3_ENTFL -