@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A9CJC3_AGRFC: (2019-01-26 )
MISNTPSFPASWNIEAAKRIADTPAGIVYELTRKDGSLAIAKVLKKKVLKDSLRGADFIAWRAGIGCVELLDQSDNILLMEHAGTETLRDVLFRDGNDDATTEIAAEVLLRYHQPSEQSPPSSLLTLPLYFESLFRKAEQDRSDGVDSPFVEAARLAQTLIDQQRDIKPLHGDLHHENIMHSDRGWIIIDPAGLIGDAALDVANMFSNPLDRFDLTRSEARIASMAAIFSRALQRDERLLLQYAFAYGCLSATWHEEDGNAEERDNELAVAATIKAVLKHF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HO_A_4(2OLC)
MTNK_BACSU
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




62 HHSearch 66.5316% 6 - C4 -3C5I - ? -
27 Fugue 65.4515% 25 - C4 -4O7O - MAK1_MYCTU -
64 HHSearch 64.9316% 11 - C4 -2PPQ - KHSE_AGRFC -
34 Fugue 63.1617% 62 - C4 -1J7L - KKA3_ENTFL -
36 SP3 62.7414% 14 - C4 -1ND4 - KKA2_KLEPN -
31 Fugue 62.2114% 19 - C4 -2PPQ - KHSE_AGRFC -
37 SP3 62.1713% 4 - C4 -1NW1 - CKA2_CAEEL -
33 Fugue 61.2919% 2 * C2 *4QT9 - ? -
38 SP3 60.8414% 55 - C4 -1J7L - KKA3_ENTFL -
65 HHSearch 60.2813% 6 - C4 -5FUT - CHKA_HUMAN -
66 HHSearch 60.2613% 11 - C4 -5FTG - CHKA_HUMAN -
49 HHSearch 57.5814% 4 - C4 -3CSV - ? -
47 HHSearch 57.4415% 21 - C4 -5IGI - ? -
59 HHSearch 57.1015% 1 - C4 -2QG7 - ? -
26 Fugue 56.9316% 17 - C4 -3JR1 - ? -
48 HHSearch 56.4515% 17 - C4 -5IGH - ? -
58 HHSearch 55.0815% 14 - C4 -2QG7 - ? -
29 Fugue 54.0611% 11 - C4 -3I1A - ? -
55 HHSearch 53.9713% 19 - C4 -1ZYL - SRKA_ECOLI -
24 Fugue 53.8013% 10 - C4 -2OLC 2.8 MTNK_BACSU
51 HHSearch 49.3115% 13 - C4 -4R78 3.8 ?