@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A9FES3_SORC5: (2019-01-26 )
MRLLPNPERAWERAAHVQTLARAEIERRIPPFTGEVEVLSGGHANVNVRLGAERVLRVYRRDASAAPKEASLLAHGWRSFRVPAVLSAGDDFLVLEHVPHVPLQDTAMCGAAVGRALAEIHGVGYDSAGFLGPELAVSVPFADCIGALRGHVDAVLDRLAPALRGELSERVRAFLDANAEALRALASAPVLLHGDFKASNLHWLSSGELLVLDWEFAYAGPGLMDVGQLLRWSPGREFVAAFAGAYRESAPLPEEFERWAAAFDLFNLVGLLDGVEPGSRRAADVCGRISEVVER

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(2OLC)
MTNK_BACSU
[Raw transfer]




ADP_A_2(4DCA)
?
[Raw transfer]




GMP_A_2(5IGI)
?
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




EDO_A_7(3F7W)
?
[Raw transfer]




UNL_A_3(3JR1)
?
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




24 Fugue 74.5416% -18 - C3 -3JR1 2.4 ?
53 HHSearch 71.0317% 2 * C3 *3TDW - ? -
55 HHSearch 69.4316% -2 - C- -3N4U - ? -
37 Fugue 69.2717% -11 - C3 -2PPQ - KHSE_AGRFC -
67 HHSearch 68.9020% -9 - C3 -4DCA 4.9 ?
57 HHSearch 67.5820% -6 - C3 -3F7W 3.2 ?
39 Fugue 66.7717% -12 - C3 -3CSV - ? -
52 HHSearch 66.4720% -10 - C3 -5IGI 4.7 ?
25 Fugue 65.4016% -11 - C3 -3HAM - ? -
31 Fugue 65.0015% -30 - C3 -1ZYL - SRKA_ECOLI -
51 HHSearch 64.7620% -6 - C3 -5IGH - ? -
33 Fugue 64.4218% 13 - C3 -3DXP - ? -
29 Fugue 63.7517% -12 - C3 -2OLC 5.6 MTNK_BACSU
50 HHSearch 62.3423% -8 - C3 -5UXD - ? -
70 HHSearch 62.1220% 6 - C3 -5UXA - ? -
69 HHSearch 62.0620% 7 - C3 -5IWU - ? -
2 PsiBlast_PDB 61.6622% 7 - C3 -3UZR - ? -
65 HHSearch 61.5719% 6 - C3 -6EF6 3.2 ?
35 Fugue 61.4414% -8 - C3 -2Q83 - COTI_BACSU -
3 PsiBlast_PDB 60.8822% 8 - C3 -4DCA - ? -
66 HHSearch 55.0216% 23 - C3 -2Q83 3.4 COTI_BACSU
68 HHSearch 51.5918% 4 - C3 -3CSV 2.7 ?
61 HHSearch 48.7419% -15 - C3 -4R78 3.8 ?