@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A9GMF3_SORC5: (2019-01-26 )
MTRDALDRAAVTAFLVARHGDAVCDSAIEIRPLPGGLCSEVALVTARLRGAAGARRVTLVAKLVHGTAAREAAVYRRLSRSVGRRFSPELLGAERLGRGRWLLYLERIEPAHAWPWADSGHTARVLERLARLHEETPQGAALPAWDYEAENLAMARDTLSLAERLPRGEVPALARALPALRRVVSALPAMRRQLLAFQPLGRAVIHGDVHPGNVMVRRRDGVVEPVLLDWARARMGSPLEDVSSWLQALGYWEPEARRRHDTLLAGYLSARGLPPALTRPLRDVYWFASASNALAGALGHHLAMACGASAPGVLAAAARNAADWLRVIRRADACWS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(4R78)
?
[Raw transfer]




ERY_A_5(5IWU)
?
[Raw transfer]




ZIT_A_3(5IGI)
?
[Raw transfer]




EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




30 Fugue 79.7415% -31 - C3 -3ATS - Y3168_MYCTU -
39 Fugue 79.4916% -31 - C3 -2PPQ - KHSE_AGRFC -
44 HHSearch 78.0019% -37 - C3 -2PPQ - KHSE_AGRFC -
41 Fugue 75.2017% 10 - C3 -3CSV - ? -
31 Fugue 74.5813% -1 - C3 -1ZYL - SRKA_ECOLI -
66 HHSearch 74.3715% -8 - C3 -5FTG 3.0 CHKA_HUMAN
28 Fugue 73.6912% -17 - C3 -1NW1 - CKA2_CAEEL -
29 Fugue 70.7910% -20 - C3 -3I1A - ? -
65 HHSearch 69.9815% 6 - C3 -5FUT - CHKA_HUMAN -
45 HHSearch 69.4616% -11 - C3 -6EF6 - ? -
49 HHSearch 69.4514% -44 - C3 -3I1A - ? -
70 SP3 68.4911% 0 - C3 -1NW1 - CKA2_CAEEL -
63 HHSearch 63.6319% -13 - C3 -5IGH - ? -
64 HHSearch 62.5816% -16 - C3 -1ZYL - SRKA_ECOLI -
46 HHSearch 62.2218% -28 - C3 -5UXD - ? -
33 Fugue 62.209% -3 - C3 -2Q83 - COTI_BACSU -
35 Fugue 61.0712% 1 - C3 -2OLC - MTNK_BACSU -
47 HHSearch 60.3817% 1 - C3 -3CSV 2.8 ?
59 HHSearch 60.1517% -23 - C3 -5UXA - ? -
58 HHSearch 59.9417% -20 - C3 -5IWU 2.8 ?
62 HHSearch 58.6119% -10 - C3 -5IGI 4.0 ?
56 HHSearch 53.5815% 7 - C3 -4R78 4.2 ?