Study : A9GR62_SORC5 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: HIS_A_2(4PDY) / Model_60(4PDY/A) = [3.2] Download2893.5527.14MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV
Complex: ZIT_A_3(5IGI) / Model_66(5IGI/A) = [3.5] Download2284.2724.40MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV
Complex: BEZ_A_2(6EF6) / Model_58(6EF6/A) = [4.0] Download397.1438.89MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV
Complex: AMP_A_3(4R78) / Model_71(4R78/A) = [4.2] Download907.5129.09MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV
Consensus
[pKd Mean = 3.72]
-1620
(s=1008)
29
(s=5)
MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV