@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A9GR62_SORC5: (2019-01-26 )
MEAARETRLPCAAMAILTPLSLADARRIGALYGLEIADVRGLLAGSVNSNFALTLADGRGQVFLRVYEEQQLGAASREARMLEHLAAGGVATPQPLRRRDAAPSDTDAASDGAAFVAEHAGKPVALFPWVGGASLCQARVTPDATRRVGAALARVHLVGASFEGANASRFDLDGLDQRLRGLRSPAGARSTAPAPALPPDVAAAVDELTGRLERIRAAAPRTPGPQTLIHGDLFRDNVLWEAGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPDLVSALAAGYTAVRPLSTEERDRLFHESVIAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPEGLLALLGV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(4R78)
?
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




ZIT_A_3(5IGI)
?
[Raw transfer]




HIS_A_2(4PDY)
?
[Raw transfer]




GOL_A_7(4WH3)
NAHK_BIFL2
[Raw transfer]




57 HHSearch 89.9431% -40 - C4 -2PPQ - KHSE_AGRFC -
1 PsiBlast_PDB 89.4729% -40 - C4 -2PPQ - KHSE_AGRFC -
31 Fugue 88.2030% -33 - C4 -2PPQ - KHSE_AGRFC -
46 Fugue 69.0717% -14 * C4 *4OCV - ? -
33 Fugue 67.8812% -47 - C4 -3I1A - ? -
49 SP3 64.4516% 6 - C4 -1NW1 - CKA2_CAEEL -
61 HHSearch 62.4414% -48 - C4 -2Q83 - COTI_BACSU -
39 Fugue 61.9616% 5 - C4 -1NW1 - CKA2_CAEEL -
58 HHSearch 59.2222% -10 - C4 -6EF6 4.0 ?
32 Fugue 57.5019% -4 - C4 -1ZYL - SRKA_ECOLI -
44 Fugue 57.0013% -35 - C4 -2OLC - MTNK_BACSU -
59 HHSearch 56.9319% -32 - C4 -1ZYL - SRKA_ECOLI -
68 HHSearch 55.3522% -38 - C4 -5UXD - ? -
62 HHSearch 54.6815% -6 - C4 -4OCV - ? -
72 HHSearch 54.4320% -16 - C4 -1NW1 - CKA2_CAEEL -
73 HHSearch 54.0220% -15 - C4 -1NW1 - CKA2_CAEEL -
47 SP3 53.4312% -36 - C4 -1ND4 - KKA2_KLEPN -
67 HHSearch 53.3012% -12 - C4 -3I1A - ? -
60 HHSearch 53.2117% -8 - C4 -4PDY 3.2 ?
64 HHSearch 52.7616% -6 - C4 -4WH3 2.6 NAHK_BIFL2
66 HHSearch 48.4918% -21 - C4 -5IGI 3.5 ?
71 HHSearch 37.4515% 23 - C4 -4R78 4.2 ?