@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0D1J7_LACBS: (2019-01-26 )
MVRRLVPFNLYAKKGRFVMASEALATQYVSENTTIPVPRVLDVIALPSGKGKFLLMTGVKGKEYGPTGVTLYKMAENQRAVFTETLRGWFDQLRCLRPPDDHTISGFMVTGVSSYIIRHPETVDPFASQDEFHAQRFCQPWEPYDDALRAALEKRAKMRYKICFTHGDITPHNILVDDNLRPCALVDWECAGWMPEYWEYTRALYIRERYLGWKKVFTDIFPNYEAELTIYGSIITHDMPWYYSLNVVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3TM0)
KKA3_ENTFL
[Raw transfer]




ADP_A_4(1L8T)
KKA3_ENTFL
[Raw transfer]




GNP_C_13(5IQI)
AACA_STAAU
[Raw transfer]




ATP_A_8(3ATT)
Y3168_MYCTU
[Raw transfer]




66 HHSearch 71.3217% -6 - C2 -5IQC - AACA_STAAU -
41 SP3 67.7314% 9 - C2 -1ND4 - KKA2_KLEPN -
55 HHSearch 67.5217% 1 - C2 -5IQI 4.4 AACA_STAAU
28 Fugue 66.1915% -30 - C2 -3ATS - Y3168_MYCTU -
58 HHSearch 64.7818% -20 - C- -4H05 - ? -
59 HHSearch 62.3318% -22 - C- -4H05 - ? -
67 HHSearch 62.1817% 17 - C2 -1L8T 4.1 KKA3_ENTFL
68 HHSearch 60.3517% 15 - C2 -3TM0 4.1 KKA3_ENTFL
64 HHSearch 59.5314% -14 * C2 *4GKH - ? -
50 HHSearch 58.7216% 27 - C2 -3ATS - Y3168_MYCTU -
40 SP3 58.6813% 26 - C2 -1J7L - KKA3_ENTFL -
65 HHSearch 58.0914% -10 - C2 -4GKI - ? -
51 HHSearch 57.3416% 30 - C2 -3ATT 3.9 Y3168_MYCTU
24 Fugue 57.1513% 23 - C2 -1J7L - KKA3_ENTFL -
25 Fugue 56.7915% -6 - C2 -1NW1 - CKA2_CAEEL -
69 HHSearch 53.4312% -5 - C2 -3TDW - ? -
54 HHSearch 53.0114% -31 - C2 -5UXD - ? -
26 Fugue 52.9411% 34 - C2 -3HAM - ? -
60 HHSearch 52.7414% -18 - C2 -5IGH - ? -
53 HHSearch 52.6113% 23 - C- -3N4U - ? -