Study : B2W7V1_PYRTR (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: ATP_A_8(3ATT) / Model_72(3ATT/A) = [3.7] Download1435.8531.52MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
Complex: ADP_A_4(1L8T) / Model_60(1L8T/A) = [4.2] Download982.1127.10MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
Complex: KAN_A_9(1ND4) / Model_63(1ND4/A) = [4.6] Download2656.3314.22MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
Complex: ADP_A_7(1J7L) / Model_28(1J7L/A) = [4.8] Download855.8626.86MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
Complex: ANP_A_2(3TM0) / Model_59(3TM0/A) = [5.9] Download1098.1422.43MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW
Consensus
[pKd Mean = 4.64]
-1405
(s=654)
24
(s=5)
MSTTPDLPKERVITQEEFDNAVKLGGKFAPVFKVDEKTVVKTSDMTQLGEAAAMKMVREKTTIPVPEDQNVYTDPTTGDVPIVMDFIEGDCLLDVWDTYDNDQKQQIIEQLHSYFAQLRELKGSFIGSVDGKFCFDQVFDQDIGGHGPYEDEASFNEGLVKALKNTMISGWGDTVCDMVLAMKDHEIVFTHGDISPRNILVKDCNIVSVLDWEYSGYYPEYWEYAKAFFRPAWEKSWIKDRAVNKILKPYPLENAICQHVFSFGAW