Study : B4D9C8_9BACT (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: ZIT_A_3(5IGI) / Model_41(5IGI/A) = [3.8] Download2320.5214.67MEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGANAERENHILRLVREIVPVPAVLASGSDWSIHSFVEGIPLADAPESVHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
Complex: AMP_A_3(4R78) / Model_50(4R78/A) = [3.9] Download975.3127.04MEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGANAERENHILRLVREIVPVPAVLASGSDWSIHSFVEGIPLADAPESVHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
Complex: ADP_A_7(1J7L) / Model_23(1J7L/A) = [4.3] Download890.6730.72MEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGANAERENHILRLVREIVPVPAVLASGSDWSIHSFVEGIPLADAPESVHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
Complex: GDP_A_2(3TDW) / Model_48(3TDW/A) = [4.3] Download1085.8019.19MEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGANAERENHILRLVREIVPVPAVLASGSDWSIHSFVEGIPLADAPESVHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY
Consensus
[pKd Mean = 4.08]
-1318
(s=582)
22
(s=6)
MEEDRRHPRRQLDPALIASYLAGRKIELVQLMPLGKSNTNYRLTLADGEVCLLRLHHPGANAERENHILRLVREIVPVPAVLASGSDWSIHSFVEGIPLADAPESVHAAAEALARIASLRFTSSGWIQADGSIAPFDFGDGKSFVESMLERADVRAWVGADTAAALRRIEAAQPPAADDEPRLVHGDFNPTNILVHQRAVTGILDWEFSHAGSPYMDIGNLLRHTDPAQHGALEAGLVAGGLNVPADWRQQAEMVDLSSHLEFLTTQRSDAFKQRCADWIRDFVERY