@TOME V3
(Apr 2019)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B7DRV0_9BACL: (2019-01-26 )
MLACGSDDLRTEEGLRIAALYGWDPEDTACQLLQRGENGTFLVRTSGTRYILRRYRRERYREQEILAELAWMCALRDHINVPNVIANTEGDLATRLVGPDGERLYAVFEFIEGESPESSSSEDYRRLGELMKALHRGADAIAQSMNEDWAGWNRPVYDVQRAVREPLRHLLQFEALSEVNKTRCVSVARELERRFRTLQPGRPFVHADLHFGNIVVREPNWYCLDFDECGYGHRAFDLGVVRLHLRNRSDNFDCWAHFEHGYGDMPSRGDLATGTAARIFYMAGKIPMRQDIDSLRHNPDARIGKYLTWIEDELM

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(4R78)
?
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




EDO_A_14(3CSV)
?
[Raw transfer]




MES_B_6(3I1A)
?
[Raw transfer]




HO_A_4(2OLC)
MTNK_BACSU
[Raw transfer]




37 Fugue 73.6918% -10 - C3 -1ZYL - SRKA_ECOLI -
53 HHSearch 73.3521% 13 - C3 -6EF6 4.0 ?
41 Fugue 72.1115% -38 - C3 -2PPQ - KHSE_AGRFC -
55 HHSearch 69.7516% -29 * C3 *2PPQ - KHSE_AGRFC -
58 HHSearch 67.1714% -22 - C3 -4WH3 - NAHK_BIFL2 -
54 HHSearch 66.7117% -19 - C3 -1ZYL - SRKA_ECOLI -
1 PsiBlast_PDB 66.4027% -2 - C2 -6EF6 - ? -
38 Fugue 65.0213% -16 - C3 -2Q83 - COTI_BACSU -
49 Fugue 64.4816% -0 - C3 -4OCV - ? -
60 HHSearch 62.6217% 2 - C3 -3I1A 1.0 ?
56 HHSearch 62.5014% -6 - C3 -2Q83 - COTI_BACSU -
36 Fugue 62.4515% -5 - C3 -3I1A - ? -
64 HHSearch 62.2615% 10 - C3 -4R78 3.7 ?
40 Fugue 61.8814% 14 - C3 -3JR1 - ? -
63 HHSearch 61.5215% 11 - C3 -4R7B - ? -
57 HHSearch 61.4114% -10 - C3 -4OCV - ? -
72 HHSearch 58.4714% -14 - C3 -3C5I - ? -
45 Fugue 58.4516% -0 - C3 -2OLC 2.8 MTNK_BACSU
62 HHSearch 58.2915% -11 - C3 -5IGI - ? -
52 HHSearch 58.0812% 2 - C3 -4PDY - ? -
59 HHSearch 54.7217% 11 - C3 -3CSV 2.1 ?