Study : C1B3I2_RHOOB (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: AMP_A_3(4R78) / Model_50(4R78/A) = [3.5] Download938.2127.92MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
Complex: ZIT_A_3(5IGI) / Model_57(5IGI/A) = [3.7] Download2261.557.29MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
Complex: ATP_A_8(3ATT) / Model_52(3ATT/A) = [4.7] Download1555.9221.93MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
Complex: ADP_A_7(1J7L) / Model_22(1J7L/A) = [5.2] Download851.5217.16MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
Complex: GDP_A_2(3TDW) / Model_67(3TDW/A) = [5.8] Download1009.3019.39MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC
Consensus
[pKd Mean = 4.58]
-1323
(s=529)
18
(s=6)
MLRRAELDDDLGRRRAATPAPQRVEELLAVELPAVGEELDGAVVPIDYGTSTELTVTAPDLFAALSRHPRAGRIVASVGDVRRLSGGFSKEMLMARATYSDGSGERFVVRKVAPGRRADGLRAEYDVLSSAFHSGCPVPEPWWYDSEALGTPAIATSALSGTPAGDPNGWVAPPSSAVLASVARAAAQQHQVELAAFDANPLPPLISAEDRREALSERRAVLDGLWAEGDDAWAPAFNLVLNWLESAIPEPADPPVLVHGDFGPHNFLIEGDELSGILDWERSHAGLAVEDLAYLRPTLDDESWTAFMREYVAAGGREPSDDALVWYIVWQDFWRAVSAYRMRSLFLQSPDQVLYGISGLLLAPRFLTSAVRSVSSAHAVAGARAC