Study : C9RNP1_FIBSS (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: ADP_A_2(4DCA) / Model_117(4DCA/A) = [3.7] Download1450.708.22MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG
Complex: ADP_A_7(1J7L) / Model_98(1J7L/A) = [4.0] Download1418.368.97MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG
Complex: GNP_C_13(5IQI) / Model_107(5IQI/C) = [4.5] Download1595.4110.18MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG
Complex: GDP_A_2(3TDW) / Model_116(3TDW/A) = [5.7] Download1100.478.63MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG
Complex: GNP_A_5(5IQC) / Model_108(5IQC/A) = [5.7] Download1413.878.27MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG
Consensus
[pKd Mean = 4.72]
-1395
(s=161)
8
(s=1)
MSEEVEKINLDDYAATGEGATAISYTHKTRDTIAKLYHPGFEADCAKKDFLTSCTAFALGVPTPKPIRLVTDGERFGAEYELIRNKRSFSRIISEEPGRLQELSLIFAEMAKKLHSTKADTSKLVSTKEKFRRFYLEKAVVPDFYKQKALAFINTVPNTPTCLHGDLQISNVITDGKRTLWIDMGDFGYGDPGWDLGMLWSMTNRMDEQKADLVFHMNKEKLLAHWNIFFPAYLGTTDPQKIAEATKRILPFAAVKIPYMFYIAKHFTLPDEAYPYIAKLFG