@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D2PS12_KRIFD: (2019-01-27 )
MEHDIAALLHKAAPRSEIAEVLPRSGGQLATVFEVRRIAAAPLIIKLYSPEWAWKQAKEIHVYDLLAPHLGTAIPQVVHAEPEGETHAFTVMTMLTGVPLCETTAPDYQVVYKQLGELLTAIHRIPQPAYGYLTDEVLEPLPSNDAYMRRQFAKKLQEFEELGGDRALHARLTEYVEQHSGLFASSSRPVLCHNDFHEGNVLVDPDTWQVQGIVDVENAIAADPLIDLAKTQYYSIKNDQAKLSGLLTGYGELPSDWVERTAVYRLYHALELWDWFRLIGVIDPLESIAADLVSLLGTSRVAGRPDAVR

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ANP_A_3(3W0S)
KHYB_ECOLX
[Raw transfer]




GOL_A_5(3HAM)
?
[Raw transfer]




GOL_A_5(3HAM)
?
[Raw transfer]




MES_B_5(3I1A)
?
[Raw transfer]




MES_A_3(3I1A)
?
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




GOL_A_2(5IWU)
?
[Raw transfer]




70 Fugue 78.1718% 10 - C1 -3ATS - Y3168_MYCTU -
68 Fugue 72.8815% 15 - C1 -3JR1 - ? -
67 Fugue 72.4415% 4 - C1 -3HAM 3.1 ?
50 HHSearch 71.5520% -35 - C1 -3I1A 2.2 ?
53 HHSearch 71.4819% -51 - C1 -3DXQ - ? -
48 HHSearch 70.9317% -62 - C1 -3W0S 3.7 KHYB_ECOLX
35 HHSearch 69.6517% -19 - C- -3N4U - ? -
76 Fugue 67.9514% -34 - C1 -2PPQ - KHSE_AGRFC -
36 HHSearch 67.9121% -40 - C1 -5UXD - ? -
54 HHSearch 65.7819% -48 - C- -3DXQ - ? -
49 HHSearch 65.6715% -50 - C1 -3DXP - ? -
55 HHSearch 64.7415% -42 - C1 -2PPQ - KHSE_AGRFC -
45 HHSearch 63.8914% -21 - C1 -5IQI - AACA_STAAU -
44 HHSearch 63.6614% -20 - C1 -5IQC - AACA_STAAU -
47 HHSearch 61.5016% -10 - C1 -3HAM 2.7 ?
46 HHSearch 60.8515% -28 - C1 -1ZYL - SRKA_ECOLI -
81 Fugue 60.3315% -11 - C1 -3CSV - ? -
69 Fugue 60.2618% 15 - C1 -1J7L 4.3 KKA3_ENTFL
38 HHSearch 59.5816% -6 * C1 *3TDW - ? -
79 Fugue 59.4914% -13 - C1 -2QG7 - ? -
43 HHSearch 55.4618% -1 - C1 -5IWU 2.9 ?
72 Fugue 54.3315% 25 - C1 -3I1A 2.2 ?
41 HHSearch 53.6116% -14 - C1 -3CSV 2.9 ?