@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D2Q2Q9_KRIFD: (2019-01-27 )
MAAPAQSEQMRRLAGLLGVKLDPFSTGGESLTFGITGTELLVTIPTEPGEQDVQRQAELTRRVADRISIPVPEIVRVVAEAEAVVVRRLPGVPLIAVPTPQRAALTRSVALAVGTVLAELHTWDRDGYADLAPVDEYSPEEWRAETAELVSDLTPLLTTDQRDDVRRFLGRPAPRPAGRHVLSHNDLGIEHILVSPDAVTGVIDWNDAAITDPAYDFGLLLRDLGPEALRTALARYAHQIGGDPELLERASYYAVCALLEDLAFGHETGRVEYVAKSLHGWRWTFQAAG

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(2OLC)
MTNK_BACSU
[Raw transfer]




GDP_A_2(3TDW)
?
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




LLL_A_3(3HAM)
?
[Raw transfer]




LLL_A_3(3HAM)
?
[Raw transfer]




ADP_A_2(4DCA)
?
[Raw transfer]




BEZ_A_2(6EF6)
?
[Raw transfer]




51G_A_6(5IQC)
AACA_STAAU
[Raw transfer]




GOL_A_2(5IWU)
?
[Raw transfer]




GMP_A_2(5IGI)
?
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




EDO_A_16(3CSV)
?
[Raw transfer]




59 HHSearch 77.3321% 19 - C2 -5UXD - ? -
67 HHSearch 77.0322% 17 - C2 -3HAM 3.6 ?
58 HHSearch 76.0122% 18 - C- -3N4U - ? -
4 PsiBlast_PDB 75.1622% -5 - C2 -5C4L - ? -
3 PsiBlast_PDB 74.8322% -6 - C2 -5C4K - ? -
66 HHSearch 74.7423% 9 - C2 -4DCA 4.5 ?
8 PsiBlast_PDB 74.6422% -6 - C2 -3SG8 - ? -
60 HHSearch 74.5921% -1 - C2 -5IGH - ? -
61 HHSearch 74.2021% 6 - C2 -5IGI 3.4 ?
5 PsiBlast_PDB 74.0522% -3 - C2 -3SG9 - ? -
7 PsiBlast_PDB 73.9822% -8 - C- -3N4U - ? -
10 PsiBlast_PDB 73.8922% -5 - C2 -6CD7 - ? -
14 PsiBlast_PDB 73.4422% -1 - C2 -4DTA - ? -
12 PsiBlast_PDB 73.3722% 1 - C2 -4DT8 - ? -
13 PsiBlast_PDB 72.9422% -3 - C2 -4DT9 - ? -
2 PsiBlast_PDB 72.8622% -0 - C2 -4N57 - ? -
11 PsiBlast_PDB 72.6822% -3 - C2 -4DTB - ? -
18 PsiBlast_PDB 72.1822% 5 - C2 -4DFU - ? -
16 PsiBlast_PDB 72.1822% 2 - C2 -4DE4 - ? -
17 PsiBlast_PDB 71.4822% 14 - C2 -4DFB - ? -
64 HHSearch 70.8819% 21 - C2 -5IWU 3.0 ?
31 Fugue 70.5116% -13 - C2 -3HAM 0.8 ?
56 HHSearch 70.1517% -14 - C2 -3TDW 5.9 ?
62 HHSearch 68.0016% -0 * C2 *5IQC 3.2 AACA_STAAU
36 Fugue 64.0119% 0 - C2 -3CSV 3.1 ?
68 HHSearch 61.6220% -16 - C2 -3CSV 3.1 ?
71 HHSearch 59.9018% -12 - C2 -6EF6 2.9 ?
35 Fugue 58.6615% 13 - C2 -2OLC 3.5 MTNK_BACSU
46 SP3 52.2416% 6 - C2 -1ND4 4.2 KKA2_KLEPN