@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D3E974_GEOS4: (2019-01-27 )
MLYTLGQKIGEGGCSEVFEVGDNRIIKLAKENTSFEALRREYLNNCIAWECGLPIPQPFELTKMSGRPGIVFEHIAGKTMMERFFNQVIVSHNNEVKQADVQLTAQLLFRVHQALAEGKELPCQKSIIKSNILSVNYLSASEKESAISLLESLETKQCLCHGDPNPRNVIVKDDGEAILLDWMNATIGNPEADIAEYIVMIRYAVLPSSFPEETRDMFDSIREDLIDIFIDEYYRLSGISYDDVVPWIIPILARKLSADAISDVEKKKLVAEIRRDLGKQKNRV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_C_13(5IQI)
AACA_STAAU
[Raw transfer]




ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]




ADP_A_6(2OLC)
MTNK_BACSU
[Raw transfer]




GNP_A_5(5IQC)
AACA_STAAU
[Raw transfer]




ADP_A_2(4DCA)
?
[Raw transfer]




69 Fugue 74.2116% 9 - C3 -4XHG - ? -
70 Fugue 73.9615% 34 - C3 -2PPQ - KHSE_AGRFC -
42 HHSearch 70.9216% -36 - C3 -3ATT - Y3168_MYCTU -
41 HHSearch 70.3916% -32 * C3 *3ATS - Y3168_MYCTU -
33 HHSearch 67.9218% -12 - C3 -4H05 - ? -
37 HHSearch 66.8916% 3 - C3 -3TM0 - KKA3_ENTFL -
38 HHSearch 66.4116% 9 - C3 -1L8T - KKA3_ENTFL -
57 SP3 66.3513% 0 - C- -1F3M - ? -
60 Fugue 65.6015% 20 - C3 -2OLC 5.3 MTNK_BACSU
26 HHSearch 63.9715% -4 - C- -3N4U - ? -
67 Fugue 63.8912% 2 - C3 -3CSV - ? -
27 HHSearch 63.3516% -0 - C3 -2PPQ - KHSE_AGRFC -
32 HHSearch 62.6718% -4 - C- -4H05 - ? -
68 Fugue 62.2516% 38 - C3 -1J7L - KKA3_ENTFL -
43 HHSearch 61.3415% -2 - C3 -4DCA 4.0 ?
44 HHSearch 61.2715% -19 - C3 -1ND4 - KKA2_KLEPN -
64 Fugue 59.9314% 32 - C3 -3HAM - ? -
63 Fugue 59.3514% 0 - C3 -3UQC - MVINL_MYCTU -
49 HHSearch 58.6114% 3 - C3 -1ZYL - SRKA_ECOLI -
34 HHSearch 58.5218% -6 - C3 -3TDW - ? -
51 SP3 56.4516% -5 - C3 -1O6Y 4.8 PKNB_MYCTU
29 HHSearch 54.5317% -1 - C3 -5IQI 4.7 AACA_STAAU
30 HHSearch 49.1116% 8 - C3 -5IQC 3.9 AACA_STAAU