Study : D3QBL2_STANL (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: KAN_A_9(1ND4) / Model_2(1ND4/A) = [3.8] Download1754.75-0.25MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
Complex: KAN_A_9(1ND4) / Model_24(1ND4/A) = [4.0] Download1896.21-3.82MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
Complex: B31_A_3(3TM0) / Model_27(3TM0/A) = [4.0] Download1227.67-2.41MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
Complex: KAN_A_9(1ND4) / Model_59(1ND4/A) = [4.0] Download1324.27-19.37MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
Complex: GMP_A_2(5IGI) / Model_36(5IGI/A) = [4.9] Download1258.6735.17MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC
Consensus
[pKd Mean = 4.14]
-1492
(s=277)
1
(s=17)
MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC