@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D3QBL2_STANL: (2019-01-27 )
MCGMTSLVDTALRLTYPDYRWRRLEAARPILGVRTYALTGRYRLVVKIALEEDLIDEDHGPCGEARRLAWLAGHGIPVPEVVDTGVMGDDEYLVLRLPDDAVPADQVASEQRLAACDAVADVARAVHGIDHRGCPFDRRLRVTIPRAKEACLFAEIRSRDPMAKLTSLIAKALWVGREEPVVCHGDLRPDSVLIDARTRRVAAVLDVARLGVADRYTDLAAATRGWRAGGLDKRVWWRYGEIPADADRVRLYRLLAEFCLPRPGTGRVEPRQDGGDVRRCGFVRQLGHGVPGDPTVFHQRRGLVVLETFTRQVRGGGVDTGQEIGFGGFEHLALPAHRHRHVDGTRRPLARGQAGFLGQFAPGGLRGRLTGFDAAAGRLPQQVGVDGVTPAQHQDPVVGVQAQHAGTLTIDFGHDAQVMARRRGGALAWAPGCPCHRVRCGSC

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B31_A_3(3TM0)
KKA3_ENTFL
[Raw transfer]



KAN_B_10(1ND4)
KKA2_KLEPN
[Raw transfer]



KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]



KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]



KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]



KAN_A_5(1L8T)
KKA3_ENTFL
[Raw transfer]



GMP_A_2(5IGI)
?
[Raw transfer]
26 HHSearch 78.5339% -18 - C- -4H05 - ? -
25 HHSearch 77.5939% -18 - C- -4H05 - ? -
1 PsiBlast_PDB 73.9036% -10 - C- -4H05 - ? -
54 Fugue 72.6416% -12 - C7 -5HIU - ? -
59 SP3 70.0116% -61 * C6 *1ND4 4.0 KKA2_KLEPN
23 HHSearch 67.9426% -24 - C6 -4GKI - ? -
22 HHSearch 67.9226% -26 - C6 -4GKH - ? -
43 Fugue 67.7919% -30 - C6 -1J7L - KKA3_ENTFL -
24 HHSearch 65.8329% -12 - C6 -1ND4 4.0 KKA2_KLEPN
6 PsiBlast_PDB 65.6828% 1 - C6 -4FEU - ? -
5 PsiBlast_PDB 64.9828% 7 - C6 -4EJ7 - ? -
3 PsiBlast_PDB 63.9628% 10 - C6 -4FEV - ? -
4 PsiBlast_PDB 63.7328% 6 - C6 -4FEX - ? -
48 Fugue 63.6515% -27 - C6 -3ATS - Y3168_MYCTU -
7 PsiBlast_PDB 63.0828% 9 - C6 -4FEW - ? -
9 PsiBlast_PDB 62.5628% 15 - C6 -4GKI - ? -
28 HHSearch 62.2321% -9 - C6 -1L8T 2.3 KKA3_ENTFL
2 PsiBlast_PDB 61.9931% -33 - C6 -1ND4 3.8 KKA2_KLEPN
27 HHSearch 61.3621% -8 - C6 -3TM0 4.0 KKA3_ENTFL
8 PsiBlast_PDB 60.9328% 14 - C6 -4GKH - ? -
21 Blastp_CBE 60.6231% -31 - C6 -1ND4 3.0 KKA2_KLEPN
36 HHSearch 41.7518% -12 - C6 -5IGI 4.9 ?