@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D4YZ71_SPHJU: (2019-01-27 )
MPSHLTHIWRLLKWGRTLARHGALTGIERDPLTPTPVRRLVRVARLGARVPRQPRYADAFQSIGPAAIKLGQTLATRPDLVGEDAANDLLRLQDALPPVPFATIRAQMEQSFGRPLETLYSRFDEAPVGAASIAQVHRAVTTDGRDVAVKVIRPGVIDQFNRDIQTYEWAAAHVEMLGGEVARLRPRLVIANMKRWTARELDLRREAASASELGEAMEAMPGYRVPAIDWDRTTGKVMTMEWIDGVKISDRDALIAAGHDVKEIAARLVNAFLRQAIAEGFFHADMHQGNLFVTANGDIVAIDFGIMGRIDRRARMWLAEILYGLITGNYRRVAEIHFEAQYVPGHHNVEEFATALRAVGEPMRGKPVRELSVGGMLDGLFAITRDFDMQTQPHLLLLQKTMVMVEGVATALDPDINLWETSGPYVKEWLRAELGPEAKAADALIENVRILQRLPGLVKRIEEAFPEKGGAPPPPPLTEVRLIRVGSGWRYMLVALLAGLAGAGAMAAATTFL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(5YK1)
?
[Raw transfer]



ANP_A_2(5YK1)
?
[Raw transfer]



ANP_A_2(5I35)
COQ8A_HUMAN
[Raw transfer]



ADP_A_2(5YK0)
?
[Raw transfer]



ADP_A_2(5YK0)
?
[Raw transfer]



ANP_A_7(1AD5)
HCK_HUMAN
[Raw transfer]



ANP_B_2(1TQM)
RIO2_ARCFU
[Raw transfer]



OOQ_A_2(5H0B)
HCK_HUMAN
[Raw transfer]



0WB_A_2(4G3F)

[Raw transfer]



STU_A_3(3CBL)

[Raw transfer]



EDO_A_9(2Q0N)

[Raw transfer]
49 HHSearch 87.2422% -8 - C6 -4PED - COQ8A_HUMAN -
50 HHSearch 74.1222% -4 - C6 -5YK0 5.3 ?
51 HHSearch 73.7222% -2 - C6 -5YK1 5.2 ?
1 PsiBlast_PDB 64.1831% -24 - C6 -5YJZ - ? -
3 PsiBlast_PDB 64.1331% -22 - C6 -5YK1 5.2 ?
2 PsiBlast_PDB 63.8831% -26 - C6 -5YK0 5.3 ?
6 PsiBlast_PDB 63.1928% 2 - C6 -5I35 5.2 COQ8A_HUMAN
4 PsiBlast_PDB 63.0831% -26 - C6 -5YK2 - ? -
5 PsiBlast_PDB 62.4828% 1 - C6 -4PED - COQ8A_HUMAN -
27 Fugue 57.7515% -27 - C6 -5CKW - ? -
38 Fugue 54.8218% -11 - C8 -4RIC - FAN1_HUMAN -
32 Fugue 54.7015% -58 - C7 -3Q6K - ? -
44 SP3 52.479% -8 - C6 -1KOB - ? -
61 HHSearch 52.4015% -10 - C6 -2Q0N 2.6
56 HHSearch 51.3215% -53 - C6 -5H0B 7.4 HCK_HUMAN
54 HHSearch 49.5614% -9 - C6 -2Y7J - PHKG2_HUMAN -
67 HHSearch 49.1516% -21 - C6 -3COM - STK4_HUMAN -
28 Fugue 49.0915% -6 - C7 -5T8V - ? -
57 HHSearch 49.0516% -58 - C6 -1AD5 5.7 HCK_HUMAN
31 Fugue 48.0616% -26 * C8 *4M59 - ? -
69 HHSearch 43.8915% -32 * C6 *3CBL 6.9
26 Fugue 43.2715% 11 - C6 -1TQM 4.2 RIO2_ARCFU
68 HHSearch 39.2416% -37 - C6 -4G3F 5.9