@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D5HFE1_9FIRM: (2019-01-27 )
MRRTTIDEAIARVDDWKGKEISYKPVSGGITNPNFKVDVEGEHFFLKIPGAGTDYINREVCHEANMIADESKAGPRVYYYFEDTGVEIFQWLDGYRQVTFGDVYDKDIFQSIFERIRDFHHLETKPLNLKQSIFEQAWDMNARAKKGGYISPFNDKMEYLLSAIEKALAGSEELCPCHNDFWTNNLMYNEETNDLKIIDYEYASMNDPYVDLGLISAVNYFTEDMDVEMMKIYGGGKVDERAFARMKLNKIACDIKWAYWALYQAASSNVEFDYMNWYGQKMARLQHFWLDSRLDYWLDVAREKSTRIS

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]




PT3_B_12(3MES)
?
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_B_9(3MES)
?
[Raw transfer]




AMP_A_3(4R78)
?
[Raw transfer]




NBR_A_2(5FTG)
CHKA_HUMAN
[Raw transfer]




PQ7_A_11(5FUT)
CHKA_HUMAN
[Raw transfer]




177 HHSearch 75.7025% 1 - C3 -3DXQ - ? -
178 HHSearch 71.7225% -1 - C- -3DXQ - ? -
186 HHSearch 69.3720% 6 - C3 -5FUT 6.6 CHKA_HUMAN
185 HHSearch 69.0720% -0 - C3 -5FTG 7.4 CHKA_HUMAN
187 HHSearch 66.3218% 18 - C3 -3C5I - ? -
4 PsiBlast_PDB 65.4121% 12 - C2 -2CKQ - CHKA_HUMAN -
179 HHSearch 63.1820% 26 * C3 *4R7B - ? -
180 HHSearch 62.7420% 27 - C3 -4R78 6.2 ?
182 HHSearch 61.4118% 3 - C3 -2QG7 - ? -
8 PsiBlast_PDB 61.2819% 9 - C2 -2IG7 - CHKB_HUMAN -
181 HHSearch 61.2118% 5 - C3 -2QG7 - ? -
2 PsiBlast_PDB 60.1921% 15 - C2 -2CKO - CHKA_HUMAN -
191 HHSearch 59.6419% 11 - C3 -3MES 5.9 ?
152 Fugue 59.5216% -15 - C3 -1NW1 - CKA2_CAEEL -
166 Fugue 58.6618% 2 - C3 -4OCV - ? -
167 SP3 57.8814% -8 - C3 -1NW1 - CKA2_CAEEL -
184 HHSearch 57.6016% 5 - C3 -1NW1 - CKA2_CAEEL -
183 HHSearch 57.1016% 9 - C3 -1NW1 - CKA2_CAEEL -
1 PsiBlast_PDB 56.5725% -16 - C- -3DXQ - ? -
153 Fugue 55.8415% 5 - C3 -2QG7 - ? -
159 Fugue 45.2115% 25 - C3 -1J7L 6.3 KKA3_ENTFL