@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D6TP58_9CHLR: (2019-01-27 )
MTIQQEIFSILGIKGPVLLGEGSESQTYDYTADKVVKIYKGPVEQDNLDHLCSIYTWLSTHHLPFAVPEIYAIESHEGTVYLIEKKLAGRPISAVYAQLQMYERQRLLSNYLEAVRHLQGVVLPTQPYGSIFHAPGPSPVPYQSWRKFLRETAPLKLPQTQDDLRQEGIDVARLLEKFFQDIENAPDTPEKNFVHGDYFFGNVLVDDELEISAVLDVSWWSVVGDHLMDIAGAVMFLDLYEYVTPQEIASLTQQALALYGPEILTAIRIYGVYYSLLLSDCKLLDPAAYSWSIKRLREYMQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




ATP_A_8(3ATT)
Y3168_MYCTU
[Raw transfer]




ADP_A_2(4DCA)
?
[Raw transfer]




GMP_A_2(5IGI)
?
[Raw transfer]




GOL_A_5(3HAM)
?
[Raw transfer]




56 HHSearch 77.7120% -28 - C3 -3JR1 - ? -
26 Fugue 72.8118% -4 - C3 -2PPQ - KHSE_AGRFC -
31 Fugue 72.0918% -3 - C3 -3JR1 - ? -
34 SP3 72.0417% -17 - C3 -1ND4 3.1 KKA2_KLEPN
33 SP3 71.8317% 37 - C3 -1J7L 5.3 KKA3_ENTFL
18 Fugue 71.7319% 23 - C3 -1J7L 5.3 KKA3_ENTFL
44 HHSearch 69.6914% -25 * C3 *3TDW - ? -
49 HHSearch 69.5116% -50 - C3 -4DCA 4.3 ?
35 SP3 68.9418% 8 - C3 -1NW1 - CKA2_CAEEL -
1 PsiBlast_PDB 68.6724% -44 - C3 -3W0Q - KHYB_ECOLX -
22 Fugue 67.3613% -48 - C3 -1ZYL - SRKA_ECOLI -
29 Fugue 66.6818% -5 - C3 -3CSV - ? -
45 HHSearch 66.0414% -27 - C- -3N4U - ? -
43 HHSearch 66.0114% -4 - C3 -5IQI - AACA_STAAU -
50 HHSearch 65.9816% -42 - C3 -3HAM 2.9 ?
46 HHSearch 64.9914% -6 - C3 -5IQC - AACA_STAAU -
61 HHSearch 64.9518% -17 - C- -4H05 - ? -
53 HHSearch 64.8515% -28 - C3 -5IGH - ? -
54 HHSearch 64.2015% -29 - C3 -5IGI 4.9 ?
17 Fugue 63.4913% 9 - C3 -3HAM - ? -
59 HHSearch 61.0117% -13 - C3 -3ATT 3.5 Y3168_MYCTU