@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D8SXP9_SELML: (2019-01-27 )
VCRALIPELQDADDSDFDVCRINGGITNISDGRFLSFAVAKVSKKDQSVVVRVFGPATEGVIDRDREIQATCHLSRAGFCPELKGVFKNGIIQTFVTARTLTPEDFLDDAVVAKVAKELRRLHQQEVPGEKESMVWTEINRYFELASAVTKFESPEDQRKLEAVSFDELRQEINTLKEIGARLKGPVVYAHNDLLPGNVMVDAQGDKCYYFIDFEYSGYNYRGFDIGTHFNEYAGFDCDFCAYPSKDRQLNFLRHYLRPDDPEKATHEELEELFVEANFYALAAHITWSAWAIVQATSSAAIDFDYMSYFFKRMKMYREQKAKFLPVVRGFLAGKSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U85_A_3(4BR3)
CHKA_HUMAN
[Raw transfer]




GQG_A_2(4CG9)
CHKA_HUMAN
[Raw transfer]




PC_A_3(2CKQ)
CHKA_HUMAN
[Raw transfer]




QLW_A_2(4CGA)
CHKA_HUMAN
[Raw transfer]




5R9_A_3(5EQP)
CHKA_HUMAN
[Raw transfer]




HC6_A_3(3F2R)
CHKA_HUMAN
[Raw transfer]




NBR_A_2(5FTG)
CHKA_HUMAN
[Raw transfer]




PQ7_A_11(5FUT)
CHKA_HUMAN
[Raw transfer]




5R8_A_3(5EQE)
CHKA_HUMAN
[Raw transfer]




JH5_A_8(5AFV)
CHKA_HUMAN
[Raw transfer]




EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]




EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]




32 HHSearch 87.8631% -7 - C4 -5FTG 3.1 CHKA_HUMAN
1 PsiBlast_PDB 87.4129% -32 - C4 -2QG7 - ? -
33 HHSearch 86.6131% 2 - C4 -5FUT - CHKA_HUMAN -
3 PsiBlast_PDB 85.8229% 6 - C4 -2CKO - CHKA_HUMAN -
17 PsiBlast_PDB 85.2728% -4 - C4 -3F2R 5.2 CHKA_HUMAN
5 PsiBlast_PDB 84.6929% 4 - C4 -2CKQ 2.3 CHKA_HUMAN
18 PsiBlast_PDB 81.7028% 12 - C4 -5EQE 5.1 CHKA_HUMAN
2 PsiBlast_PDB 81.6330% -19 - C4 -2IG7 - CHKB_HUMAN -
8 PsiBlast_PDB 81.4228% 14 - C4 -5FUT 7.1 CHKA_HUMAN
6 PsiBlast_PDB 81.1628% 18 - C4 -5AFV 4.8 CHKA_HUMAN
11 PsiBlast_PDB 81.1228% 16 - C4 -3ZM9 - CHKA_HUMAN -
25 HHSearch 81.0633% 23 - C4 -2QG7 - ? -
13 PsiBlast_PDB 81.0428% 13 - C4 -4CG8 - CHKA_HUMAN -
19 PsiBlast_PDB 80.9828% 16 - C4 -5EQP 4.8 CHKA_HUMAN
12 PsiBlast_PDB 80.7428% 16 - C4 -4BR3 7.1 CHKA_HUMAN
14 PsiBlast_PDB 80.2928% 13 - C4 -4CG9 6.6 CHKA_HUMAN
10 PsiBlast_PDB 80.2928% 17 - C4 -4DA5 - CHKA_HUMAN -
15 PsiBlast_PDB 80.1528% 14 - C4 -4CGA 7.3 CHKA_HUMAN
7 PsiBlast_PDB 80.0228% 17 - C4 -5FTG 6.6 CHKA_HUMAN
16 PsiBlast_PDB 79.8828% 12 - C4 -2I7Q - CHKA_HUMAN -