@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : G8PTR3_PSEUV: (2019-01-29 )
MTETLTKELAVTKALELPFWKAPSNAEILGGGITNFNVKITDEGRTYVVRLGEDIVEHGVMRFNELSACRAAHAAGVAPAVRYFQKGALVQDYIPADPLVEEEIQQLKMLELIAALLGKVHRDATQLIRGPVLAFWVFHILRDYTETLRLLDSDHISKLDDLMQKAQKLEAAVGNVHLVLCHNDLLPANILNENGRLWLVDWEYAGMNSPLFDLGGLATNAGLSEGLQKLLLETYFDTPVSDELWERYNAMKCASLLRESMWSMVSEQTSKIQFDYADYTRENLLRFERAFAELQLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]




PT3_A_6(3MES)
?
[Raw transfer]




63 HHSearch 81.5624% -17 - C3 -3DXQ - ? -
64 HHSearch 77.7624% -14 - C- -3DXQ - ? -
62 HHSearch 73.9021% 31 - C3 -2QG7 - ? -
61 HHSearch 72.7721% 21 * C3 *2QG7 - ? -
72 HHSearch 72.1622% -2 - C3 -5FUT - CHKA_HUMAN -
71 HHSearch 71.9622% 4 - C3 -5FTG 3.1 CHKA_HUMAN
67 HHSearch 70.9124% 12 - C3 -4R78 - ? -
36 Fugue 70.8922% 11 - C3 -1NW1 - CKA2_CAEEL -
65 HHSearch 70.7520% -12 - C3 -3C5I - ? -
68 HHSearch 70.3924% 14 - C3 -4R7B - ? -
13 PsiBlast_PDB 69.6623% -12 - C3 -2CKQ - CHKA_HUMAN -
11 PsiBlast_PDB 69.3123% -12 - C3 -2CKO - CHKA_HUMAN -
49 SP3 68.8919% -6 - C3 -1NW1 - CKA2_CAEEL -
59 HHSearch 68.6321% 5 - C3 -1NW1 - CKA2_CAEEL -
69 HHSearch 68.5419% -6 - C3 -3MES 2.9 ?
60 HHSearch 68.3421% 7 - C3 -1NW1 - CKA2_CAEEL -
1 PsiBlast_PDB 68.2025% 11 - C3 -4R77 - ? -
3 PsiBlast_PDB 67.6425% 8 - C3 -4R7B - ? -
2 PsiBlast_PDB 67.4325% 10 - C3 -4R78 - ? -
37 Fugue 66.2717% 22 - C3 -2QG7 - ? -