@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : K6XNV5_9ALTE: (2019-01-31 )
MTTAKTPEFSNAQVIELLLQQYKLSGQLKKLPGYCDQNLLLNTDDGKQYIVKIANAVEPKLELEMQNAAMAHLTHKQCAVPCAVNNIQGDNISIITDVSKQSFCLRVLTFIPGKFYADANSNTHSRALWTDLGQFIGNIDLALADFQHPGAFRYLDWDLAQGYRVCMSKKHLLNPQQVNLVDKFLSLYQTQTMPVLSQLPQGVIHNDANDYNLLIDDINTPNKISGLIDFGDMVHSHIVNELAIACAYALMGEKSVHEDILSALTSIVAGYHKIRPLLDVELEVLYSLIALRLCTTVCNAALAIQQQPDNEYLLVSVQPAWQLLEQLSAVNSYAVLCQLRLACQLPVDSGQSAAEIINYRKKHLGKTLSLSYQQPLKMVRGQGAYLFNEQGVPYLDMVNNVCHVGHCHPKVVAAGQAQLAKLNTNTRYLHDNIVNYADKLLATMPDKLSVCMLVNSGSEANELAFRLARCFTKSRELLVVDGAYHGNTNACIEASPYKFDGPGGEGAPAYVHKVTLPDPYRGEFLGNNSDAATAYANSVKETIEQLALNNKKPGAFICESLQGVAGQIIMPDGYLTQVYAHVRAAGGVCIADEVQVGFGRVGSHMWAFETQNVIPDIVTLGKPIGNGHPMAAVITTQEIADAFVTGMEYFNTFGGNPVSCAIGIAVLDVIEQEQLQNHALTTGQYFQDQLNKLKQRFELIGDVRGKGLFIGVELVEDRTTKQPATDKTSWLIEHFKQHHILLSTEGPFYNILKIKPPLAFNSGDADKFINVLELGLAVLSH

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EXT_B_6(5G4J)
?
[Raw transfer]



EXT_A_3(5G4J)
?
[Raw transfer]



EXT_A_3(5G4J)
?
[Raw transfer]



P00_A_11(4JEX)
ARGD_SALTY
[Raw transfer]



P00_B_26(4JEX)
ARGD_SALTY
[Raw transfer]



P00_B_18(4JEZ)
ARGD_SALTY
[Raw transfer]



P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]



P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]



P00_A_13(4JEZ)
ARGD_SALTY
[Raw transfer]



PLP_B_13(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_A_3(2PB2)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_B_8(5G4I)
?
[Raw transfer]



PLP_B_9(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_A_3(5G4I)
?
[Raw transfer]



PLP_A_3(5G4I)
?
[Raw transfer]



PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]



PLP_B_4(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_5(3DXW)
ACLR_ACHOB
[Raw transfer]



PLP_B_6(2ZUK)
ACLR_ACHOB
[Raw transfer]



PLP_A_3(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_A_2(5M46)
?
[Raw transfer]



EDO_A_7(4JEY)
ARGD_SALTY
[Raw transfer]



EDO_B_7(2PB0)
ARGD_SALTY
[Raw transfer]
148 HHSearch 86.4041% -89 - C8 -5G4J 5.8 ?
149 HHSearch 86.3841% -90 - C8 -5G4I 3.7 ?
21 Blastp_CBE 79.5341% -26 - C8 -5G4J 4.9 ?
22 Blastp_CBE 78.8841% -27 - C8 -5G4I 3.6 ?
2 PsiBlast_PDB 78.7041% -26 - C8 -5G4J 5.8 ?
1 PsiBlast_PDB 77.7341% -24 - C8 -5G4I 3.7 ?
29 Blastp_CBE 72.6031% 6 - C8 -5WYF - ILE2E_LACBU -
26 Blastp_CBE 72.4131% 7 - C8 -5WYF - ILE2E_LACBU -
33 Blastp_CBE 71.9831% 7 - C8 -4YSN - ILE2E_LACBU -
28 Blastp_CBE 71.9131% 8 - C8 -5WYF - ILE2E_LACBU -
25 Blastp_CBE 71.7931% 12 - C8 -5WYA - ILE2E_LACBU -
31 Blastp_CBE 71.7631% 11 - C8 -4YSN - ILE2E_LACBU -
32 Blastp_CBE 71.3831% 11 - C8 -4YSN - ILE2E_LACBU -
154 HHSearch 71.2631% 3 - C8 -4YSN - ILE2E_LACBU -
30 Blastp_CBE 71.1631% 8 - C8 -4YSN - ILE2E_LACBU -
27 Blastp_CBE 71.1431% 10 - C8 -5WYF - ILE2E_LACBU -
63 Blastp_CBE 71.0534% -5 - C8 -3DXV - ACLR_ACHOB -
24 Blastp_CBE 71.0231% 12 - C8 -5WYA - ILE2E_LACBU -
19 PsiBlast_PDB 70.9431% 14 - C8 -5WYA - ILE2E_LACBU -
62 Blastp_CBE 70.7134% -5 - C8 -2ZUK 2.7 ACLR_ACHOB
61 Blastp_CBE 70.6534% -5 - C8 -3DXW 3.0 ACLR_ACHOB
59 Blastp_CBE 68.5233% -3 - C8 -5M46 2.9 ?
80 Blastp_CBE 51.6731% 1 - C8 -4JEY 4.1 ARGD_SALTY
92 Blastp_CBE 51.4131% 1 - C8 -2PB0 3.2 ARGD_SALTY
85 Blastp_CBE 51.3131% -3 - C8 -4JEX 3.7 ARGD_SALTY
93 Blastp_CBE 51.1131% -0 - C8 -2PB0 3.1 ARGD_SALTY
83 Blastp_CBE 51.1131% 0 - C8 -4JEW 3.7 ARGD_SALTY
89 Blastp_CBE 51.0531% -1 - C8 -4JEZ 3.9 ARGD_SALTY
86 Blastp_CBE 50.8531% 2 - C8 -4JF1 4.2 ARGD_SALTY
84 Blastp_CBE 50.8031% -3 - C8 -4JEX 4.1 ARGD_SALTY
88 Blastp_CBE 50.7431% -1 - C8 -4JEZ 3.5 ARGD_SALTY
82 Blastp_CBE 50.7131% 3 - C8 -4JEW 3.9 ARGD_SALTY
87 Blastp_CBE 50.6131% 1 - C8 -4JF1 4.2 ARGD_SALTY
81 Blastp_CBE 49.8431% -0 - C8 -4JEY 3.8 ARGD_SALTY
91 Blastp_CBE 49.5331% 1 - C8 -2PB2 3.9 ARGD_SALTY
114 Blastp_CBE 40.3131% -7 - C8 -2E7U 3.7 GSA_THET8