@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : K9DXJ0_9BURK: (2019-01-31 )
MNREEACRVVTVPESMSAALAGYAWARDRVGESGGAVYRLHGKPGAPDLYLKHGRHAVADAIGDEMTRLRWLAGRMPVPAVVHFDRSADEAWLLMTAVPGRTAYQLLQADPAQHDIVVDALARFLQRLHAIPTSACPFNSDHDYRLGLARSRIEAGLVDEDDFDEERAGWTARQVWDAMQALLPLAPDPVVTHGDYSLDNLLIVDGQVAGCIDAGRVGIADRYQDLAIAWNCLGEFGGSLQERFLRQYGIAAPDRRKLQFHLMLDELF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_B_10(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




ATP_A_4(4EJ7)
?
[Raw transfer]




27 Blastp_CBE 98.1559%-122 - C6 -4FEV - ? -
6 PsiBlast_PDB 97.3957%-122 - C6 -4GKI - ? -
26 Blastp_CBE 96.3559%-111 - C6 -4FEV - ? -
7 PsiBlast_PDB 96.3257%-115 - C6 -4EJ7 6.8 ?
31 HHSearch 96.3059%-116 - C6 -4GKI - ? -
4 PsiBlast_PDB 96.1157%-110 - C6 -4FEW - ? -
1 PsiBlast_PDB 95.8858%-119 - C6 -4FEV - ? -
23 Blastp_CBE 95.3659%-122 - C6 -4FEX - ? -
25 Blastp_CBE 94.1459%-124 - C6 -4FEV - ? -
28 Blastp_CBE 93.9859%-114 - C6 -4FEV - ? -
30 HHSearch 93.9159%-112 - C6 -4GKH - ? -
24 Blastp_CBE 93.6759%-128 - C6 -4FEX - ? -
2 PsiBlast_PDB 93.6458%-115 - C6 -4FEX - ? -
5 PsiBlast_PDB 93.1557%-112 - C6 -4GKH - ? -
3 PsiBlast_PDB 92.6257%-112 - C6 -4FEU - ? -
21 Blastp_CBE 92.6159%-106 - C6 -4FEX - ? -
22 Blastp_CBE 92.3459%-105 - C6 -4FEX - ? -
8 PsiBlast_PDB 67.3139% -30 - C6 -1ND4 4.2 KKA2_KLEPN
52 SP3 67.2138% -31 - C6 -1ND4 4.5 KKA2_KLEPN
29 Blastp_CBE 66.9740% -27 - C6 -1ND4 4.2 KKA2_KLEPN
32 HHSearch 63.7037% -25 - C6 -1ND4 4.4 KKA2_KLEPN