@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : O06916_LEGPN: (2019-01-31 )
MLKQPIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINVDKTILSYYRHERIVEDIAVYGQDLLSRNQNNQSRLESFKYFKEMFDPNNVVEIAFATEQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(3I0O)
?
[Raw transfer]




AMP_A_2(3I0Q)
?
[Raw transfer]




CKI_A_2(3Q2M)
?
[Raw transfer]




MES_A_3(3I1A)
?
[Raw transfer]




MES_A_3(3I1A)
?
[Raw transfer]




MES_B_6(3I1A)
?
[Raw transfer]




MES_B_6(3I1A)
?
[Raw transfer]




39 HHSearch 96.52100%-120 - C4 -3I1A 2.6 ?
21 Blastp_CBE 96.52100%-120 - C4 -3I1A 2.6 ?
1 PsiBlast_PDB 95.79100%-120 - C4 -3I0O 5.3 ?
24 Fugue 95.70100%-118 - C4 -3I1A 2.7 ?
3 PsiBlast_PDB 95.70100%-118 - C4 -3I1A 2.7 ?
4 PsiBlast_PDB 95.47100%-120 - C4 -3Q2M 5.1 ?
2 PsiBlast_PDB 93.54100%-137 - C4 -3I0Q 5.1 ?
27 Fugue 41.4213% -23 - C4 -2PPQ - KHSE_AGRFC -
29 Fugue 41.2413% -15 - C4 -1ZYL - SRKA_ECOLI -
41 HHSearch 38.1414% 28 - C4 -6EF6 - ? -
42 HHSearch 37.1016% -21 - C4 -2Q83 - COTI_BACSU -
44 HHSearch 36.6914% -27 * C4 *2PPQ - KHSE_AGRFC -
46 HHSearch 36.5016% -32 - C4 -1ZYL - SRKA_ECOLI -
40 HHSearch 35.7013% -37 - C4 -4PDY - ? -
25 Fugue 34.6316% 21 - C4 -2Q83 - COTI_BACSU -
56 HHSearch 34.0217% 0 - C4 -5UXD - ? -
45 HHSearch 32.4211% -6 - C4 -4WH3 - NAHK_BIFL2 -
43 HHSearch 32.3111% 8 - C4 -4OCV - ? -
64 SP3 32.229% 10 - C4 -1NW1 - CKA2_CAEEL -
50 HHSearch 31.9814% 14 - C4 -1ND4 - KKA2_KLEPN -