@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q70KE3_MICEC: (2019-02-01 )
MVAAPIPVAGWGDKDDPWECLGERSSGATVYRVGEVPSFYVKTTPPRHPDDHRFNPTKEAERLRWLAAQGLPVPEVVALDANDELAWVVTRALPGRPAARHWKPEERWRVIDVVADVARTLHALPVAECPFERRLADLIHQASSSMALGALDLDDVDPSHEGWTAQQLWDELSKMTPPAEDDLVVCHGDFCLDNVLVDPETLTLAGILDVDRAGVSDRWMDLALALYNIGQDDVMGLRSAARRALPPAVRHHRRPAQADLHPTAGRISLS

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KAN_B_10(1ND4)
KKA2_KLEPN
[Raw transfer]




89 HHSearch 83.9339% -8 - C- -4H05 - ? -
90 HHSearch 81.7639% -7 - C- -4H05 - ? -
1 PsiBlast_PDB 73.4243% -9 - C- -4H05 - ? -
91 HHSearch 68.4431% 6 * C1 *4GKH - ? -
92 HHSearch 68.2031% -1 - C1 -4GKI - ? -
80 SP3 63.1626% 8 - C1 -1ND4 - KKA2_KLEPN -
7 PsiBlast_PDB 62.6434% 1 - C1 -4GKH - ? -
21 Blastp_CBE 62.5435% 4 - C1 -4FEX - ? -
23 Blastp_CBE 62.5135% 3 - C1 -4FEV - ? -
24 Blastp_CBE 62.2635% -2 - C1 -4FEV - ? -
22 Blastp_CBE 62.2435% 1 - C1 -4FEX - ? -
8 PsiBlast_PDB 62.0034% -3 - C1 -4GKI - ? -
25 Blastp_CBE 61.7235% -3 - C1 -4FEV - ? -
5 PsiBlast_PDB 61.7134% 4 - C1 -4FEU - ? -
95 HHSearch 61.2321% 28 - C1 -1L8T - KKA3_ENTFL -
4 PsiBlast_PDB 61.1634% 3 - C1 -4EJ7 - ? -
2 PsiBlast_PDB 61.0534% 3 - C1 -4FEV - ? -
3 PsiBlast_PDB 60.7934% 4 - C1 -4FEX - ? -
6 PsiBlast_PDB 60.7434% 4 - C1 -4FEW - ? -
94 HHSearch 60.3221% 32 - C1 -3TM0 - KKA3_ENTFL -
26 Blastp_CBE 56.6034% 18 - C1 -1ND4 3.8 KKA2_KLEPN