@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S2YZI8_9CORY: (2019-02-02 )
MIDTDSLKNARFYATKTEPITDVDIVAEAPLERPELIKGKDAPGILTFARVHREGGSDLYQLVVDKQGRDILGEEETARAAGKQLSNGYAVGSGVLHKLTDPALPPVETVRAVGEQSNTSWIYNDRVIVKYFRRLTPTPNPEIELLEELTAAGCTHSAPLRGWTSVDIEGHTYVTAMLQDLVPGTDGYDYVTGTPDAFDATALGEAIRDVHTVLASTCETGTLAPGALATNLDRRLTGLVGRAPQLKEYEEKIRALYSTLAETSVPTQRIHGDLHLGQTLVDGDSWALIDFEGEPAASLEERRRPDSPLRDVAGMIRSFGYAAAASGQDQSWADARTAELIAGYGEADEAILRAYIADKCAYEVVYELENRPHMVHVPLDALASLV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4U98)
MAK_MYCVP
[Raw transfer]




MAL_B_6(4O7P)
MAK1_MYCTU
[Raw transfer]




ACP_A_2(4U98)
MAK_MYCVP
[Raw transfer]




MAL_B_6(4O7P)
MAK1_MYCTU
[Raw transfer]




ATP_A_3(4WZY)
MAK_MYCVP
[Raw transfer]




18 HHSearch 84.2034% -17 - C8 -4O7P 5.2 MAK1_MYCTU
19 HHSearch 83.8133% -21 - C8 -4U98 4.6 MAK_MYCVP
17 HHSearch 83.2734% -18 - C8 -4O7O - MAK1_MYCTU -
20 HHSearch 82.9133% -18 - C8 -4WZY - MAK_MYCVP -
36 Fugue 80.8537% 22 - C8 -4O7O - MAK1_MYCTU -
15 HHSearch 80.2535% 10 - C8 -5JY7 - MAK_MYCS2 -
3 PsiBlast_PDB 69.7037% 7 - C8 -4O7P - MAK1_MYCTU -
2 PsiBlast_PDB 69.2637% 6 - C8 -4O7O - MAK1_MYCTU -
14 Blastp_CBE 68.4037% 29 - C8 -4O7P 5.1 MAK1_MYCTU
1 PsiBlast_PDB 68.3138% 6 - C8 -5JY7 - MAK_MYCS2 -
4 PsiBlast_PDB 62.8538% 20 - C8 -4U94 - MAK_MYCVP -
5 PsiBlast_PDB 62.5038% 24 - C8 -4U98 4.7 MAK_MYCVP
6 PsiBlast_PDB 62.4438% 23 - C8 -4WZY 3.5 MAK_MYCVP
16 HHSearch 49.9735% 16 - C8 -5JY7 - MAK_MYCS2 -
37 Fugue 48.4216% -27 - C8 -2PPQ - KHSE_AGRFC -
42 Fugue 47.2710% -45 - C8 -3I1A - ? -
29 HHSearch 45.2217% -9 - C8 -2PPQ - KHSE_AGRFC -
24 HHSearch 42.5517% 0 - C8 -5IGH - ? -
23 HHSearch 41.9417% -2 - C8 -5IGI - ? -
39 Fugue 41.7920% -4 - C5 -4GEW - TYDP2_CAEEL -