Study : V4IJZ3_9ACTN (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: GLY_C_3(5JDW) / Model_8(5JDW/A) = [3.3] Download4201.3524.30MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
Complex: GLY_C_3(5JDW) / Model_25(5JDW/A) = [3.4] Download4507.7022.19MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
Complex: ABU_C_3(6JDW) / Model_9(6JDW/A) = [3.4] Download374.836.50MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
Complex: ARG_A_2(4JDW) / Model_13(4JDW/A) = [3.8] Download17521.7830.31MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
Complex: ALA_C_3(8JDW) / Model_11(8JDW/A) = [4.2] Download8424.9121.40MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG
Consensus
[pKd Mean = 3.62]
-7006
(s=5842)
20
(s=7)
MAACSLSPVVRWDVSEVGYDDCNIMADTRDGRYVVKIFHTSRSPALCARYVDVVRRVTEAGVAHPRLHRAEGSALLHHRPTGNRLMVMDRVEGITFLDADACPDDTELASVVEQTYRIHALDLYPEYVHDWWAIPQIATLAAEVAHLLTPGDQDRVAAAVETFGRLRVGTLPQVFSHGDLTKANLLRTPCGVPAVLDLAVSNRYARVHDLSMLAVNVLHGSPRPLPERVALLTGLYARHAPLTAAEHAALPGYVLAAAAMELLGAEREWSQGNRSEETRYLRELGRTTLRAAADWALVPALSTSRTRNRAPQDAPHTDERNPMTGPASPVNSWDEFTQLREIIVGDAAHARIPRMTDPSAWLACYPTMTPAELKRVEAGKFPRQVVEESDEDLAQLTKTLRGLGVTTHRPPAVDHSRSFSSPYWEADGYISYCPRDITLVAGSTLIEVASPMRSRYFELFNLRPLFQQYMLEGATWIAAPRPQLRDELYTRDEESRPLLGEAEPVFDAANVLRVGQDFFYQVSRSGNERGLDWLRSTLRLVDPTVRVHPLRDVYGYTHIDSTITVLRPGLVMLNPARIARDEVPEAFRGWDVLWCPEPRPTETALPYHLSEPWISMNLLMVNPELAIADSDQPELLRALEAKGISVLPHRLRHQRVLGGGFHCVTLDIARDGLREDYFG