Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDESGGEARAYMLGSGIVVKTQRPHRLRPRTSLEKEAHVLSLLAGPLAGRIPRLFGYGREDTAAGPVEFLVMSRIRGCAALHAGL-----PAREALLASLADVLRSVHAADVTGLRDSGLL----PADVDSAALRGRLQLGFADACDGFAAHRDRYAGAGAPERIAIAAVDALAG--LTDESPVLLHSNPGPTHV-FVGDGGLCTGLIDFGDAYASHPALDLRSWPDPADRIVLHEAYTGGRPTTRGFDAVWTVVMILADLNAMLHRADLAEAAGRDLALRLAQL
4DTB Chain:A ((30-232))---EGNDCIAYEINRDFIFKF--PKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP-SETYQMSFAGYTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLS---------------RELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFIS-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 686 -20102 -29.30 -105.24
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -29.30
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_4DTB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dtb-query.scw
PDB file : Tito_Scwrl_4DTB.pdb: