Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTLFEGETPVDLDTVGSFVAQQCPQWGHLPLRAMTTSGTEHTTYRLGDELLVRVPRDASSEAGLRKEIDWLPRLRDG--VDLEMPVIEHVGAPSLDYPHTWTINRWVSGEDASAR---VLAGDVPSSWADVLAELVASLRAVDLREFAPHELPQGQRGGHVRCRVEALHGQTDPMSGPLDPTPVMGLMEAALDA-GAPAPEPVLLHGDLIPGNLVVRN-GRLSGLLDFGTLTTGYAAWDLTPAWWV----LDRSGRERFRELLE--VDDVSWAWGRAFAASQGLLADWVYAPR-GHALAPLGARAVAEALAD
5IQI Chain:C ((9-303))---------ATNVKAMKYLIEHYFDNFKVDSIEIIG-SGYDSVAYLVNNEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYISD---ELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTD-ISECTIDN-KQNVLEEYILLRETIYNDLTD--IEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTY-


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1232 -16684 -13.54 -59.37
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -13.54
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: